Paraclostridium sordellii: RSJ16_08250
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Entry
RSJ16_08250 CDS
T05252
Name
(GenBank) mannonate oxidoreductase
KO
K07456
DNA mismatch repair protein MutS2
Organism
psor
Paraclostridium sordellii
Pathway
psor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RSJ16_08250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psor03400
]
RSJ16_08250
DNA repair and recombination proteins [BR:
psor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
RSJ16_08250
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GFIT
Motif
Pfam:
MutS_V
CRF-BP
MutS_III
Motif
Other DBs
NCBI-ProteinID:
AUN14213
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Position
1614189..1616093
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AA seq
634 aa
AA seq
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MNNTTIEKLQLNEFKELVKIHCVSSLGKELIDKLSPSKNLSVVKRRLMGNKEARNVLSNS
NHIPLEGLFNINSIIEKVDKGMILDPIELTKVQDFLRGCKKIKNFMLDKEFYAKTLSSYA
LNITECDFIESEIDYIIKNNKVDSNASKELKKIRRNIEVCEVKIKERLNKFITSSSNKKY
IQEFIISKRGDRYVIPIKASYKNEVDGAILDSSSKGTTVFIEPSNVSKFSVELVSLKSEE
SIEEYKILSYLTELIFEKIVQIKLNLEIVSEYDMVFAKAKYSLNNNCITPNINGRGYTKI
VNGKHPLLKGNVVPLNFEIGKDYRSLIITGPNAGGKTLSLKTVGLLTLMVQCGFDIIADE
SSQISVFENVFVDIGDNQSIENALSTFSSHIKNIAEIMNASNKSTLVLFDEIGSGTEPNE
GASLAIAILEEFYQMGCITVASTHYGEIKNFANMHEEFENAGMMFDKDTLEPLYKLVIGK
SEDSNALFISKKMGIRDKVLKRASAYMKDKDYNLDLVKRSKIEGKEEVVEELKEIVSYQV
GDKVKLLDKDDFAIVYKEVDKFNNVEVLYKDEFITVNVRRTELYLKAQELYPQDYDTNSL
FISYEDRKLEKDIKRGSKKALKKIQKEIKNNKIK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaataatacaactattgaaaagctacaattaaacgaatttaaagaattagtaaaaata
cactgtgtaagttcacttggaaaagaacttatagataaactaagtccaagtaaaaattta
agtgtagtaaaaagaagactgatgggaaataaagaagctagaaatgtattatcaaatagc
aatcatataccattagaaggcttgtttaatataaattccataatagaaaaagtagataaa
ggaatgattttagatcctatagaacttacaaaggttcaagattttttaagaggatgtaaa
aaaattaaaaacttcatgctcgataaggagttttacgctaaaactttaagttcttatgca
cttaacataactgaatgtgattttatagaaagtgaaatagactatattataaaaaataat
aaagttgattcaaatgcttctaaagaacttaaaaagataagaagaaatattgaggtttgt
gaagttaaaataaaagagcgattaaataaatttataacatcaagtagcaataaaaaatat
atacaagaatttataataagcaaaagaggagatagatatgtaatacctattaaagcttct
tataaaaatgaagttgatggagctattttagattcttcatcaaaaggaactacagttttt
atagaaccgtcaaatgtatctaaattcagtgtagagcttgttagtttaaaatcagaagaa
agtatagaagagtataaaatactttcatacttaactgaattgatatttgaaaagatagtt
caaattaaattaaatttagagatagtatctgaatatgatatggtctttgcaaaggctaaa
tatagtttgaacaataactgtataacacctaatattaatggtagaggatatactaaaata
gtaaatggaaaacatccattactaaaaggaaatgtagtaccacttaactttgaaatagga
aaagattatagaagccttataataacaggtccaaatgcaggtggaaagactttatcattg
aaaactgttgggctattaactttaatggtacaatgtggatttgatattattgcagatgaa
agtagtcaaataagcgtatttgaaaatgtatttgtagatataggtgataatcaaagtatc
gaaaatgcactaagtacattttcttctcatataaaaaatattgctgagataatgaatgct
agtaataaatcaactttagtgttatttgatgaaattggaagtggaacagaaccaaatgag
ggagcatcattggctattgcgatactagaagagttttaccaaatgggatgtataacagtt
gcatctactcattatggggagataaagaattttgcaaatatgcatgaagaatttgaaaat
gcaggaatgatgtttgataaagatactttagaacctttatataagcttgttattggaaaa
tcggaagatagtaatgctttgtttatatctaaaaagatgggtataagagataaagtatta
aaaagagctagtgcttatatgaaggataaagactataatttggacttggttaaaagaagc
aagattgaaggtaaggaagaagttgttgaagagcttaaagagatagttagttatcaagtt
ggggataaggttaagttattagataaagatgattttgcaatagtttataaagaagttgat
aaattcaataacgttgaagttttgtacaaggatgaatttataactgtaaatgtaagaaga
acagagctatatttaaaagcacaggaactatatcctcaagattatgatactaatagtttg
tttatttcctatgaagatagaaaactagaaaaagatattaaaagaggttctaaaaaggcg
cttaaaaagattcaaaaggaaataaaaaataataaaattaagtaa
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