Paraclostridium sordellii: RSJ16_17610
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Entry
RSJ16_17610 CDS
T05252
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
psor
Paraclostridium sordellii
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psor03016
]
RSJ16_17610
03036 Chromosome and associated proteins [BR:
psor03036
]
RSJ16_17610
Transfer RNA biogenesis [BR:
psor03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
RSJ16_17610
Prokaryotic type
RSJ16_17610
Chromosome and associated proteins [BR:
psor03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
RSJ16_17610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
GIDA_C_1st
Pyr_redox_2
FAD_oxidored
DAO
FAD_binding_2
Pyr_redox_3
Pyr_redox
ThiF
AlaDh_PNT_C
HI0933_like
Thi4
Lycopene_cycl
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AUN15915
UniProt:
A0A9P1PBT8
LinkDB
All DBs
Position
complement(3544078..3545973)
Genome browser
AA seq
631 aa
AA seq
DB search
MLNFDAGNYDVIVVGAGHAGCEAALATARMGHKTLVITLSLDSIALLPCNPSIGGTGKGQ
LVKEIDALGGEMGINIDKTFIQSRMLNTAKGPAVHSLRAQADKTRYHEEMKKTLENEPNI
DIVMDEVVDILSEGNVVKGVVTKLGCIYHSKAVVLATGVYLNSRIYMGEVSFNEGPNALG
YSKFLTDKLVDLGLRMRRFKTGTPARIHRDSIDFSVMEIQNGDERVTPFSFLNDELARKQ
EPCYLTRTNISTHEIIMNNLGRSPMYAGKIDSTGARYCPSIEDKIVRFSDKDSHQIFIEP
EGESTKEMYIQGISTSLPYEVQIQMYKSVKGLENARIMRPAYAIEYDCIDPTQLKITLEI
KGVENLFSAGQFNGTSGYEEAASQGLIAGINAALKIQGKEPFVLDRSEAYIGVLIDDLVT
KGTNEPYRMMTSRCEYRLYLRQDNADMRLTQKGYDMGLVNEDRYNKFLEKKELIEKELER
LKTERVTPKDINHLLEEKGASPIKVGYSLYEFLKRPEVDYDMIEAAGKGAGENVPYAIKE
QCVIMTKYEGYIDKQLKQIDQFKKLENKKLSEELNYSAIDGLRIEARQKLDAIKPISIGQ
ASRISGVSPADISVLLIYLEQQRRGRGEKNE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgttaaattttgatgcaggaaattatgatgtaatagtagttggggctgggcatgcagga
tgtgaagctgcactagctacagctagaatgggacataaaacacttgttataactctttcg
ctagattctatagcacttttaccatgtaacccatctataggaggaacaggtaaaggtcaa
ttagtaaaagagatagacgccctaggtggagagatgggtatcaatatagacaagacattt
atacaaagtagaatgctaaatacagcaaaagggccagcagttcattctttaagagctcaa
gcagataaaactagatatcatgaagaaatgaaaaaaacactagaaaatgagcctaatata
gatattgtaatggatgaagtagtagatatattaagtgaaggcaatgttgtaaaaggagtt
gtaacaaagctaggatgtatatatcattctaaagcagttgttttagctacaggagtatat
ctaaactctagaatttatatgggtgaggtttcatttaatgaaggacctaatgctcttgga
tacagtaaatttttaactgacaaacttgtagatttagggttgagaatgagaagatttaag
acaggaacacctgcaagaatacacagagatagtatagatttttctgttatggaaatccaa
aatggagatgaacgtgtaactccattttcatttttaaatgatgagttggcaagaaagcaa
gagccatgttacttaacgagaacaaatataagtactcatgaaataattatgaataactta
ggaagatctcctatgtatgctggtaagatagatagtacaggagctagatattgcccttca
atagaagataaaatagtaagattcagtgataaagattcacatcaaatatttatcgagcca
gaaggcgaaagtacaaaagaaatgtatatacaaggtatatctacaagtttaccttatgaa
gtacaaatacaaatgtataaaagtgtaaaaggacttgagaatgctagaataatgagacca
gcttatgctattgagtatgattgtatagaccctactcaattaaaaataactcttgaaata
aaaggtgttgaaaacttatttagtgcaggtcagtttaatggaacatcaggttatgaagag
gcagcttctcaaggattaatagcaggaataaatgcagcattaaaaattcaaggaaaagaa
ccatttgttttagatagatcagaagcctatataggagttttaatagatgatttagtcaca
aaaggaactaatgaaccatatagaatgatgacatctagatgtgaatatagactatattta
agacaagataatgcagatatgagacttactcaaaaaggatatgatatgggtcttgtaaat
gaagatagatataataagtttttagagaaaaaagaattaatagaaaaagaactagagaga
ttaaaaactgaaagagttactcctaaggatataaatcatctattagaagaaaaaggggct
tctcctataaaagtgggatactctttatatgagttcttaaaaagaccagaagttgattat
gatatgatagaagctgcagggaaaggtgctggtgaaaatgtaccatatgctataaaagag
cagtgcgtaatcatgactaaatacgaaggttatatagataagcaattaaaacaaattgat
caatttaaaaagttagaaaacaaaaagctaagtgaagagttaaattactcagctatagat
ggtttaagaatagaagctagacaaaaattagatgcaataaaacctatatcgataggacaa
gcatctcgtatatctggagtatcaccagctgatatatcagtgttacttatctatcttgag
caacaacgaagaggtagaggtgaaaaaaatgaataa
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