Polyodon spathula (Mississippi paddlefish): 121297352
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Entry
121297352 CDS
T07273
Name
(RefSeq) neurofilament heavy polypeptide-like
KO
K04574
neurofilament heavy polypeptide
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121297352
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
121297352
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Motif
Other DBs
NCBI-GeneID:
121297352
NCBI-ProteinID:
XP_041079565
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All DBs
Position
22:complement(21021163..21033502)
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AA seq
996 aa
AA seq
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MSYTLDSLYNTSAYRKVLGDPQRNVSRSTVSLASSGFHSQPWSRGSTTSPYRRGVGGYSQ
ISSTDSLDGFNGEPRTRNEKEVLQALNDRFAVYIDKVRQLEIQNKNLEAEAAALRQSQAG
KSAIGELYEREIGDLRNMVVQLSNEKTQVQLEQEHIEEDIQQVKQRFEDEARAREEVQAA
IRAMTKYIDESGLSRLELDKKLQSLQEEAAFLKKNHEEEVRDLLSQIHRSQVTVDVRESV
RSDVTSALREIRAQLDGHTSKTTQHAEEWFQVRLDKLSEAAKYNSDAIRSAQDEISEHRR
QLLSRTTEMETLKGTKESLERQLSEIEDRHHGDVTSLQETIQQLDNELRSTKWEMSTQLR
DYQDLLNVKMALDIEIAAYRKLLEGEETRFSTGPGPYTYIESHTKIASSSGHLKIKTEDK
VKAAEKSDAVIVEEQTDETQVEVTEGGEETEKEGEAEEEKAAEEAKSEGEEEEGKEDEEE
EGEVGREAEEGGEEAAEEEEEKEAKSPEAEEEAKAKSPEVKAPEASPIEDKSKSIEPKSP
EADKSKSPEPKSVEEKTKSPTEEEAKSPEAKSPTEEKSKSAEGKSPAEEKSKSPEAKSPA
EEKSKSPEAKSPTEEKSKSAEGKSPAEEKSKSPEAKSPAEEKSKSPEAKSPTEEKSKSAE
GKSPAEEKSKSPEAKSPAEDKSKSPEAKSPTEEKSKSAEGKSPAEEKSKSPEAKSPAQEK
SKSPEAKSPAEEKAKSPQEEQPKAKVTPPKEDKKEEPEPEKEEKPESKKEEKEKPKEKET
VKKAETKEEEKESKPAESPKKAQPLKIPTKPEEKEKEPVKEKPKPEAEEREAASKVDEKE
KASPKKEEKEKATPKAEEKEKATPKEEVKEKKEALKTEKKEKPKKEDKPNEDVKPVEKKE
ESKKAPEKEEKKPEAKKEEKKAEPKKEVKIEETKKEEKREPKKEEDKAKPEKKETAKSPK
KEAAADTKTQKTEKSSSTDEKETKTAEKFGEEIAKK
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgagctacactttggactcgctttacaacacctccgcctaccgcaaggtgctcggcgac
ccgcagagaaatgtctccaggtcgaccgtctcccttgcttctagcggcttccactcccag
ccctggtcccggggatccaccacttccccgtaccgtagaggggtgggcggctacagccag
atctcctccacggacagcctggacggtttcaacggagagccgcgaacccgcaatgaaaag
gaagtgctgcaggctctcaacgaccgcttcgccgtctacattgacaaagtgaggcagctg
gagatccagaacaagaacctcgaggctgaggcagccgccctgagacagagccaagccggg
aagtcggctatcggggagctctatgagagggagatcggcgacctgaggaacatggtggtg
cagctgagcaacgagaaaacgcaggtgcagctggagcaggagcacatcgaggaggacatc
cagcaagtcaagcagaggttcgaggatgaggccagggcgcgagaggaagtgcaggcggca
atccgtgccatgaccaagtacatcgacgagtccgggttgagccgtttggaactggacaaa
aagctgcagtccctccaagaggaagccgctttcctcaagaagaaccacgaagaagaggtg
cgagacctgctgtcccagatccaccgctcgcaggtcaccgtagatgtgagggagtccgtc
aggtcagatgtcacgagtgctctgcgggagatccgagcacagctggacgggcacacttca
aaaacaacgcagcacgccgaggagtggtttcaagtgcgtttggacaagctgtcagaggca
gcgaagtacaacagtgatgccattcgtagtgcccaggacgagatttcggagcatcgtcgc
cagctgctgtcccgcactaccgagatggagacactgaaggggaccaaagagtccctggag
agacagctatctgagatagaggatcgtcaccatggagacgtcacctccctacaggaaacc
atccagcagctggacaacgaactgagaagcactaagtgggagatgtcaacccagctaaga
gactaccaggacctgctcaatgtgaagatggccctggacattgagatcgcagcttacagg
aaactgctggagggtgaagagaccagattcagcactgggcctggtccatatacctacatt
gagagccatactaaaattgcaagctcatcaggccatctcaagatcaaaactgaagacaaa
gttaaagcagcagagaaatctgatgctgtcatcgtagaggagcagactgacgagactcaa
gtcgaagtgacagagggtggggaggagacagagaaagagggagaggcagaagaggagaag
gctgcggaagaagccaaatcagagggagaggaagaagagggaaaagaggatgaggaagaa
gagggagaagtggggagggaagctgaggaaggaggagaagaagctgcagaggaggaggag
gagaaggaagccaaatctccagaagctgaggaggaggccaaagctaagtctcctgaggta
aaggctcctgaagcatctcctattgaagacaaatccaagtccatagagccaaaatctcct
gaagcagataaatccaaatccccggagccaaaatctgtggaggaaaaaactaaatctcct
actgaggaagaagcaaaatctcccgaggcaaaatctcccacagaagaaaaatctaaatcc
gcagagggaaaatcacctgcagaagagaaatctaaatccccagaggcaaaatcacctgca
gaagagaaatcaaaatctcccgaggcaaaatcccccacagaagaaaaatctaaatctgca
gagggaaaatcacctgcagaagagaaatctaaatccccagaggcaaaatcacctgcagaa
gagaaatcaaaatctcccgaggcaaaatcccccacagaagaaaaatctaaatctgcagag
ggaaaatcacctgcagaagagaaatctaaatccccagaggcaaaatcacctgcagaagat
aaatcaaaatctcccgaggcaaaatcccccacagaagaaaaatctaaatccgcagaggga
aaatcacctgcagaagagaaatctaaatccccagaggcaaaatcaccagcacaagagaaa
tctaaatccccagaggcaaaatcacctgcagaagaaaaagctaagtccccacaggaagag
caacccaaagccaaggtgacaccacccaaagaagacaaaaaggaggagccagaacctgag
aaagaagagaagcctgagagtaagaaagaagagaaagagaagccaaaggaaaaggagact
gtgaagaaggcagagacaaaggaggaggaaaaggagagcaagccagctgagtcaccaaag
aaagcacagcctctgaagatacccactaaaccagaggagaaggagaaagagcctgtaaag
gagaaacccaaacctgaggctgaggaaagagaggctgcctcaaaggttgatgaaaaagag
aaagcttctcccaaaaaagaggaaaaagagaaagccacccccaaggccgaggagaaagag
aaggctaccccaaaggaagaagtaaaggaaaagaaggaagcactcaagacagaaaaaaag
gagaaacccaagaaggaagacaaacccaacgaagatgtgaagccagtagaaaagaaagag
gaatctaagaaagctcctgagaaagaagagaagaaaccagaggccaagaaagaggaaaag
aaggcagagcctaagaaagaagtgaagatagaggagacaaaaaaggaggagaagagagag
cccaagaaagaagaagacaaggccaaacctgagaagaaggagactgcaaagtctcccaaa
aaggaggcggctgcagacaccaagacccagaaaacagagaagtcctccagcactgatgag
aaggagaccaagactgcagagaagtttggagaggaaatagccaagaagtaa
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