Polyodon spathula (Mississippi paddlefish): 121313138
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Entry
121313138 CDS
T07273
Symbol
fars2
Name
(RefSeq) phenylalanine--tRNA ligase, mitochondrial isoform X1
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121313138 (fars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pspa01007
]
121313138 (fars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121313138 (fars2)
Enzymes [BR:
pspa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
121313138 (fars2)
Amino acid related enzymes [BR:
pspa01007
]
Aminoacyl-tRNA synthetase
Class II (U)
121313138 (fars2)
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121313138 (fars2)
Prokaryotic type
121313138 (fars2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
FDX-ACB
Motif
Other DBs
NCBI-GeneID:
121313138
NCBI-ProteinID:
XP_041101279
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All DBs
Position
3:48210123..48435852
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AA seq
451 aa
AA seq
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MTLCCGLRSFFQFFKMPVYLQQTKPRTFRHVYFRSLASTSRLSESVELFGKLYPQDDYTN
VTPKILSKVGKNLHNQKYHPLWLIKERIKDHFYKQYIGRFGNPLFSVYDNMCPVVTVEQN
FDSLLIPSDHASRKKGDNYYLTCNHMLRAHTSAHQRDLVCSGLDAFLVAGDVYRRDEIDS
SHYPVFHQMEGVRLFSIHECLSLQLFANVTNGEDLLLFEKSPRTPQKQETHTLEAVKLVE
FNLKQTLSKLMTHLFGGGLEIRWVDCYFPFTHPSFEMEIKFQGEWMEVLGCGVMEQKLVN
SGGAHEKIGWAFGLGLERLAMILYNIPDIRLFWSEDERFLKQFHVSHIDQEVAFQPLSKY
PPLINDISFWLPSQGYSENDFYDLVRSIGGDLVEKVSLVDQFTHPKTEKLSHCYRITYRH
MERTLTQEEVRVLHKALETTAEQELGVVGRY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgacgctatgctgtgggcttagatcattcttccaatttttcaaaatgccagtttatctt
cagcaaacaaaacctaggaccttcaggcatgtctacttcagaagcctggcatcaacatca
agactgtcagaatcagtggaactttttgggaaactttaccctcaagatgactacaccaac
gtcacccccaaaatactctccaaagtggggaagaacttgcacaaccagaaataccaccca
ttgtggctgattaaggagcggattaaagaccatttctataagcaatacataggccgcttt
gggaacccattgttctcagtctacgacaacatgtgtcctgtggtaaccgttgagcagaac
ttcgatagcttgttgatcccatctgaccatgccagcagaaagaaaggagacaactattac
ttaacttgcaaccacatgctgagggcacacacctctgcccaccagcgagatttggtgtgc
tccggccttgatgccttcctggttgctggtgatgtctacaggcgggacgaaatcgacagc
agccactaccctgtcttccaccagatggagggtgtgcgtctgttctcaattcacgagtgt
ctttccctgcagctgtttgcgaacgtgacaaacggagaggacctgctgctctttgagaag
agtccccgcactccacaaaagcaagaaactcacaccctggaggcagtgaaactagtggag
tttaatctgaagcagactcttagcaaactcatgactcacctctttggaggagggcttgaa
atcagatgggttgactgctatttcccattcacacacccttcttttgaaatggagatcaag
tttcagggagagtggatggaggtactgggctgtggggtgatggaacaaaagctggtgaat
tcaggcggtgcccatgagaagattggctgggctttcggcctaggcctggagaggctggcc
atgatcttatacaacatcccagacattcggctcttctggagtgaagatgaacgctttctc
aaacagttccatgtttctcacattgaccaggaagttgcctttcagccgctgagcaagtac
cctccattaatcaacgacatctccttctggctgccctcacagggctactctgaaaatgac
ttctatgatttggtgcggtcgattggaggagacttggtggaaaaggtgtctctcgttgac
cagtttacccacccaaagacagaaaagctcagccactgctatcggatcacatacaggcac
atggaaaggactctgacgcaggaagaggtgcgagttcttcataaggcccttgaaacaaca
gcagagcaagagctgggtgtggtggggaggtactag
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