Polyodon spathula (Mississippi paddlefish): 121314083
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Entry
121314083 CDS
T07273
Name
(RefSeq) double-stranded RNA-specific editase B2-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121314083
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121314083
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Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
121314083
NCBI-ProteinID:
XP_041102852
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All DBs
Position
4:complement(4639735..4795290)
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AA seq
768 aa
AA seq
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MASVLGNNTRASGTPNSQLKCKFKRRRRRRSKRKEKVSMLSAFIGPFKYLSPGATSTQDE
DNLSTSSAEVKENRNVGNLEERSIVTGDRQPFCYTDIPRGGTSGLKRKRPLEGNNGHLCK
LQLIYKKLSWSVTPKNALVQLNELKPGLQYKMVSQTGPVHAPVFSISVEVNGLTFEGKGP
TKKKAKMKAAELALKSFVQFPNASQAHFAMGNLSNPSTDFTSDQADFPDTLFKEFEPSAH
NDNYPCYRPSENELISSAYRHGRLLRHTLDLMVQAKQNKHKMAALADCEKNPVVLLNELR
PGLRYICLSEAVERQHIKSFVMAVRVDGGTFEGSGRSKKLAKAQAAQTALQALFNIRLAP
EGKISHTSSRNRCPHLPQEFADSVFQLVTEKFRELTDSCTSLHARHKVLAGIVMTRGLDI
RQAQVIALSTGTKCINGEYISDQGLVVNDCHAEIVVRRAFIRFLYSQLELLLSKQREDWE
QSIFIRHKEAGYRLRENILFHMYISTSPCGDARLNSPYEITSHLHSGKHIVKKFHGHLRT
KIESGEGTVPVRGHSAVQTWDGVMQGEQLVTMSCTDKIARWNVLGIQGSLLSYFIEPIYL
HSFIVGSLHHTGHFSRTVSHRVQHIGQLPVSYKQNQPLFSGLSSTESRQPGKSPCFSVNW
TAGDTGLEVINTTTGKKKDSGSSSRLCKLTLFTRWAKLYDKLSMQVPSHGEMPVMYCKAK
LAAGTYQTVKQQLFKSLQEAGLGTWIKKPPEQGHFLLPVETAHVSTPL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtccttggaaacaacacccgtgcttcgggaactccaaacagccaactgaaa
tgcaaattcaagaggaggaggagaaggaggtctaagagaaaagagaaagtaagcatgctt
tctgctttcattggtcctttcaagtatttgagtccaggggctacgagcacacaggatgaa
gataatttaagtaccagcagtgcagaagtgaaggagaatcggaatgtaggcaatctggag
gaacgttccattgttaccggggaccggcagccattttgttacacagacatacccaggggc
gggacttcaggtctaaaaaggaaaaggcctcttgaaggaaacaatggacacctctgcaaa
ctgcagctgatctataagaaactctcctggtcagtcacaccaaagaacgccctggttcaa
ctcaatgagctaaaaccgggcttacaatacaaaatggtctcccagactggacctgtgcat
gcacctgttttttccatctccgtggaggtgaacggactcacctttgaaggcaaggggcct
acaaaaaagaaggcaaaaatgaaggctgctgagctggccctcaagtcttttgtacagttt
ccaaacgcttctcaggcccactttgcaatgggaaacctcagcaacccgtcaacagacttt
acctctgaccaggccgacttcccagacactctgttcaaagagtttgagccgtctgcacac
aacgacaactacccgtgctacaggccctcagaaaatgaattgatctccagtgcttatcga
catgggagattactccgccacacgctggacttaatggtccaagccaaacaaaacaagcac
aagatggcagccctggcagactgcgagaagaacccagtggtgctgctaaatgagctgcga
ccggggctgaggtacatttgcctctcggaggctgtggagaggcaacacatcaagagtttt
gtaatggcagtgagggttgatgggggaacatttgaaggctctggacgcagtaagaagctg
gcaaaggcccaggcagcacaaacagctctacaagccctctttaacatcaggttggcacct
gaggggaaaatcagccatacgtccagcaggaatagatgccctcatttaccacaggaattt
gcagattcagtgttccagttggtgactgagaaattccgtgagttgacagacagctgtaca
tccttgcatgcacgccacaaagtcttggcaggaatcgtaatgaccagaggtttggacatc
aggcaagcacaagtgattgcattatcaactggtaccaaatgtatcaacggtgaatatatc
agtgaccaggggcttgttgtcaatgactgccatgctgaaattgttgtacggagagcattc
attcgattcctttactctcagctggagctccttttgagcaaacagcgagaggactgggag
caatcaatcttcatccggcacaaggaagcaggctacagactgagagagaacatcctgttc
cacatgtacatcagcacctcaccctgtggagatgcacgcctcaactctccctatgagatt
acatcccacttgcacagcggcaagcacattgtgaagaaattccacggtcacctacggacg
aagatcgaatctggagaggggaccgttcctgtgcgaggtcacagtgcagtgcagacctgg
gacggggtgatgcagggggagcagctcgtcaccatgtcctgcacggataaaattgccaga
tggaatgttcttggtatccagggatcgctcctcagctactttatcgagcctatctacctg
cacagcttcattgtggggagccttcatcacaccggtcacttctcaaggacagtgagccat
cgggtacagcacattggtcagctgccagtgtcatacaagcagaatcagcctctttttagt
ggattaagcagcactgagagccggcagccaggaaagtccccttgcttcagtgtgaactgg
actgcaggggacactggactggaggtcatcaacaccacgacaggcaagaagaaggactcg
ggcagctcatcccggctctgcaagctcacactcttcactcgctgggcaaagctttatgac
aagttgagcatgcaagtgccgagccatggggaaatgccagtgatgtattgcaaggccaag
ctggctgctggaacataccaaactgtgaagcagcagttgtttaaatcgctgcaggaagcc
ggactgggcacctggataaagaagccgccggagcaggggcactttctactgcctgtagaa
acggcacatgtcagcacccccctgtga
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