Polyodon spathula (Mississippi paddlefish): 121314133
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Entry
121314133 CDS
T07273
Name
(RefSeq) sickle tail protein homolog isoform X1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
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GFIT
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NCBI-GeneID:
121314133
NCBI-ProteinID:
XP_041103012
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Position
4:complement(8496664..8722526)
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AA seq
2078 aa
AA seq
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MSKPSRLARPSSAGAASKPPSARKEDFGSRSKTVSLGEKLPRTGSEGTLVKKQPKQQVQM
APVAMHRRARHKEHGNSNLRVTSAEDAEHLSKKQSDASDCTLNTKPARNIPRRHTVGGPR
SSKEILGMQTSDMDRKREAFLEHLKQKYPHHASAISGHQERLREQAIQCMLASLHSELDM
QRYLMKIESSQRIISPKHSQSPQPGPGDQAEHQLVVSEESLEVMSEEEVPTAFTRGSRSR
ASLPVVRSTNQTKDRSLGVLYLQYGDETKQIRMPNEITSGDTIRALFVSAFPQQLNMKML
ESPNVAVYIKDDARKMYYELGDVRNITDHSCLKVYHKDPAHAFNHNPRPANGDVRMHREI
VYTTREGQHTMRQPMGPPPPHVIPSSLPPPAAHSMPPSPSRIPFGGPRTMALPGSATIPR
DRLSSVPPSRSISPSPSAILERRDVKPDEDMSNKSIALMRSEGLYADPYMHHEGRLSIAS
SHSGHPGDIQDHSMGYHRGSIRSTGSYSSATMATEMMEHHTVYRQKSRKYTDSHLPTLGS
KTPPPSPHRITDMRMMDIHTTQNAHVPPLQTVQLDRSSPVRHSFKKESGTSVAIETVSMA
RSPMTSPVVFDLAPGPGDKPLLGHGPPPSPSDPKTRERMKVMEKQIASLTGLVQSALLKG
PNTSNAKEASSENTMKADSLVNSTSSGEEVKSSAGTVESMSTITLPPPGGSAPAQGSLLH
FRKNVSDLRLQLQQMRQLQLQNQETLRVMLKRAESEINGKVLEVVKRMEDPVQRQRVVVE
EDRQRYLGEEEKIVTQLCNLERYVDELHRDSTSSTVHRAVTLKDVEDGAVSLRKVGESLA
GLKGEFPMLQNKMRAVLRVEVEAVRFLKEEPHKLDSLLKRVKTLTESLTGLRRCATEMTQ
VTKTTVTEYESEAPITVNMQPQEQGVHIQTPSQPNFPSTLPEPQGSSIKSEVMPASPVVI
HHVQSAPVAIQQSQHSATLLHHSQSPPATPTLRLHSSSMAVQSLQSTSDNVQQSQESSTA
ILQQYHTTLNPKLAAQAMNIGNEATMQSLLVEEIQTSRTRNRNRVVSIEAAEKEWEEKRL
NVGHYDGKQFEKLLQEAQANMMKGIPSLEVLQGAAPPPLPPPPNPDEVDTLHVLEPQAEE
APHTEPGIEKVVKSPPPPPPPRRTYPPGSGLTTGRSGEVIFTSRQEAVSAQEAETAAAQV
QQTKLPRSPSESKSPPQTPPPIIASSSREEEDEGDKIMAELQVFQKCTFMDVGTKSIVEH
PRVETQFREIRPGALISPREKKQSMEILGEERQTDTDENGNETALDSPQVIYYVTAQISN
KPPSLQMEELQEPSVDGTAESNLQFVANEPFVFQECSYVENQGYFPDRQHQFQISYTETQ
QEVPDVEQKQEMRTAHCIQKEELTRTIPQKGSIEDTMIKMSTENSEATNASPLPTEMSVS
QLNSLMKNQEAPVTLESPQELTEEGHSEQVVLRSKSSKVNIKYFEDADSNPSSPSEESPT
PIDNIAFMITDTEVQALSCGEFQEIVSNKGENVQTVNVDANREMTTQGYSHSQLDSEDPA
AGLDRKPVIIIFDEPMDIRSAYKRLSTIFESEEELERMLAEERIDEENEEAEETDSDRKE
VSLESRADRVERADQVSSVDSCNYLQTNNAHLLEPPGGSTAEAKPNVLDGSKQDAKKKFK
FKFPKKQLSALTQAIRTGTKTGKKTLQVVVYEEEEEPDGTVKQQKEAKRFEIRSKLTDDE
TTSTTVKTIATVQQASSNSQYRTDEIRKNTYKTLDSLEQTIKQLETTISEMGPKSPEETV
LEESRTFSFQKAESAEQAEPQVELGSVRESAAPVNYQKGLQWKRSKPQLLPRAAATTTIT
CEQSSSAISSTSRMPVPMSSKSRQQPGSPDKAGTQQKLQEPQRQFRQANGSAKKADGDYK
ASSPIVPASKIPAFSPSSGKGSSGSASSSDSTNPINSSSSKSSIPSALLNPHGSRSSLHH
PSSSSHIPSISNGSLRLQSPTHTGKGPSLSISPQTQNGRPPPSSSASCSPSPVSSTSLSP
GVKSIRTIHTPSFISYKGHNGKPTPSSSSAKESAQNHT
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccttcccgcttagccagaccctcatcagctggagcagcttctaagcctcct
tcggccaggaaagaagatttcggcagcagatcaaaaacagtcagcttaggggaaaagctg
ccgaggactggcagcgaggggaccctggtcaaaaagcagcctaagcagcaggtgcagatg
gcaccagtggctatgcacaggagagctcgacacaaagaacacgggaacagtaatttacga
gtaacatcagcagaggatgccgaacacctcagcaaaaagcagagtgatgctagtgactgc
actttgaatactaaacctgcccggaatatcccacgaagacacacagtaggaggtccgagg
agctccaaagagatactaggaatgcagacctcagacatggatagaaaaagagaggctttt
ctagagcatttgaaacagaaatatccacatcacgcatcagccatttcgggtcaccaagag
cgacttagagagcaggccatacagtgcatgttggcctcgcttcactcagagcttgacatg
caaaggtacttgatgaaaatcgagtcatctcaaagaatcataagcccgaagcactcccag
agcccgcagcctggtcctggagatcaggccgagcatcagttggtcgtctcggaggagtca
ttggaagtcatgtctgaggaagaggtcccaactgctttcactaggggcagccgctcaagg
gcaagcctcccggtggtgaggtcaaccaaccagacaaaggacagatcactaggtgtgctt
tatctgcagtatggagacgaaaccaaacagataaggatgccaaatgaaataacgagtggg
gacacaatccgtgccctctttgtaagtgccttcccacaacagctcaacatgaaaatgttg
gagtctcctaatgtagcagtatacatcaaggatgatgcacggaaaatgtactacgaactt
ggtgatgtaaggaacattacagaccattcctgcctgaaggtttaccacaaggaccctgcc
catgcgttcaatcacaatcccagacctgcaaacggagacgtgaggatgcacagagaaata
gtctacactaccagggagggccagcataccatgcgtcaacccatgggccccccaccccct
cacgtcatccccagctcgctgcctcctcctgctgcccattctatgcccccttcgccttcc
aggatcccattcggtgggccccgtaccatggccctaccaggcagtgccacaatcccaaga
gaccggctgtccagcgtgcctccctccaggtctatctcgcccagcccaagtgccattctg
gagagaagggatgtcaagcctgatgaggacatgagcaataaaagcattgcactgatgcgc
agtgaaggcctgtatgcagacccttacatgcaccatgaggggcggctgagcattgcctcc
tcccacagtggccacccgggagacatacaggaccactccatgggctatcaccgtggctcc
atcaggtcaacaggctcttactccagtgctaccatggcgacggaaatgatggagcaccac
actgtgtacaggcagaagtcaaggaagtacacagacagccatttgcctactttaggctcc
aaaaccccacccccttccccccacaggataactgacatgaggatgatggacattcataca
acccagaatgcccacgtgcctcctcttcagaccgttcagctcgacagatcgtctcccgtc
cgccattccttcaagaaggaatccgggacgtcggttgccatagaaacagtaagcatggca
cggagccccatgacttcgcctgttgttttcgacttggcgccagggccaggagacaagccg
ttgctgggacatggcccacctccatcacctagtgaccctaaaactagggagagaatgaag
gtcatggagaagcaaattgccagtttgactggacttgttcagtctgcacttttaaagggg
ccaaataccagtaatgccaaagaagcttcaagtgagaacaccatgaaggctgactccctc
gttaacagcacaagcagtggagaagaagtaaagagttctgcgggtaccgtggagtccatg
tccaccatcactctccctcctcctgggggctctgcaccagctcaagggagtctgctgcat
ttcagaaagaatgtctctgacctccggcttcagcttcagcaaatgaggcagctgcagctg
cagaatcaggagacgctgcgggtgatgttgaagagagcagagtcggagatcaatggcaag
gttctggaggtggtgaagaggatggaagaccctgtgcagaggcagagagtggtggtagag
gaggacaggcagagatatctgggggaggaggagaagatcgtcacacagctgtgcaatctg
gagagatacgtggatgagctgcacagagactcgacctcctccactgtgcacagagccgtc
actctgaaggatgtggaagacggggctgtttccctgaggaaagtgggggagtcactggca
ggattaaagggagagtttccaatgctgcagaacaagatgagggctgtgctgcgtgtggaa
gtagaggcagtgaggtttctgaaggaggagcctcacaagctcgacagcttgctgaagaga
gtgaagaccctgactgaatccctcacgggtttgagaaggtgtgccacagaaatgacacag
gttacaaaaaccacagtcacagagtatgaatctgaagctccaatcactgtgaatatgcaa
ccccaggagcagggggtgcacattcaaacaccgtctcagccaaacttcccaagcactctg
ccagagccccagggctcctccatcaagtccgaggtgatgccagcttccccagtggtgatc
caccatgtccagagtgccccagtggccatacaacagtcccagcactcggccaccctgctg
caccactcacagagccccccagccacgccgaccctgcgcctgcactcctcgtccatggcg
gttcagagcctgcagagcacctctgacaatgtgcagcaaagccaggagagcagcaccgct
atcctgcagcagtaccacaccaccctcaacccaaaactggcagcccaggcgatgaacatc
ggcaacgaagccaccatgcaaagcctcttggttgaagaaatccaaaccagcaggaccaga
aacagaaacagagtcgtgtctatcgaggcagcagaaaaggaatgggaagagaaaaggcta
aatgtgggtcattatgatgggaaacagtttgagaagctcctccaggaggctcaggccaac
atgatgaaagggatccccagcttggaagtgttgcaaggggcagcacctcccccacttccc
cctccacctaaccccgatgaagtggacacactccacgtactggagccgcaagcagaggag
gcccctcacacagagccaggcatcgagaaggtagtgaagtctccccctcctcctccccct
cctcgaagaacttatcctccagggtctggcctgacgaccgggagatcgggagaagtgata
ttcacgagcaggcaggaggcagtcagtgctcaggaggcagaaacagcagcagcacaggtt
cagcagaccaaattacccagaagtccgagtgaaagcaaatcgccaccacaaaccccgccc
cccatcattgcctcgtccagccgggaggaggaagatgagggagacaagatcatggcggag
ctgcaggttttccagaagtgcacttttatggatgtagggacaaaaagtattgttgagcat
cccagagttgaaacccaattcagagagataaggcctggggccttaatatcacccagagaa
aagaagcagagcatggagatacttggtgaagagagacaaacagacactgatgagaatgga
aacgagactgcgctggatagccctcaggttatatattacgtcactgcacagatttcaaat
aaacccccttcactgcaaatggaagagctacaggagcccagtgtggatggaactgcagaa
agcaaccttcagtttgtggcgaatgaaccatttgttttccaggagtgttcatatgtggaa
aaccaagggtacttcccagatagacaacatcagttccagatttcctatactgaaacccag
caggaagtacccgatgtggaacaaaaacaagaaatgagaactgcccattgcattcagaaa
gaagaactaaccagaaccataccacagaaaggtagcattgaagacaccatgataaaaatg
tctacagaaaactctgaagccactaatgcaagccctttgcctacagaaatgtctgtaagc
caactgaactccttaatgaaaaaccaagaggctcctgtgactctcgagtcccctcaagaa
ttgacagaagagggacacagtgaacaggtagtactcagatccaaatcatctaaggtaaat
atcaagtattttgaggatgcagactcgaaccctagttctcctagcgaagaaagccctaca
cccattgataacatagcgttcatgatcacggatacagaggtgcaggctctttcctgcgga
gaatttcaagaaatagtcagcaataagggagaaaacgtacaaactgtaaacgttgatgcc
aaccgggaaatgacgacccagggttacagccacagccagttggattccgaagacccagct
gcaggcctggacaggaagccagtcatcatcatattcgatgagccaatggatattcgatca
gcttacaagaggctgtccactatatttgagtctgaagaggagctggagaggatgttggct
gaggaaaggatcgacgaggaaaatgaggaagctgaggagaccgattcagatagaaaggag
gtctctctcgaaagcagagctgatcgagtggaaagagcagatcaagtatcaagtgttgac
agctgtaactatcttcaaaccaataatgctcatttactagagcctcccggagggtcgact
gcagaagcgaagcctaatgttctagatggcagcaagcaagacgctaagaaaaagttcaaa
ttcaagttccccaaaaagcagttgtcggctctcactcaagccattcgcacaggtacaaag
actggcaagaaaacactacaggtggtggtttatgaagaagaggaagagccggatggaact
gtaaaacagcagaaggaagccaagagatttgaaattaggtcaaagctcacagacgacgaa
accacctccactaccgtcaaaactattgccacagtacaacaggcgtcttcaaattctcag
tacaggactgatgaaattcgtaagaatacatataagacccttgacagcctggagcaaacc
attaaacagctggaaacgacaataagcgagatgggtcccaaatcgcctgaagaaactgtg
ctggaggaatctagaaccttctcttttcagaaagctgaatctgcagaacaagccgagcct
caggtggagcttggttctgtccgggagtcggcagctccagtcaattatcaaaagggcctg
cagtggaagaggtccaaaccacagctattaccaagggctgcagccaccaccaccatcacc
tgtgaacagagcagcagtgcaatctcgtcaaccagcaggatgccagtgccaatgtcttca
aaatccagacagcagccagggagcccagacaaagctggaacacaacagaagctccaggag
ccccagaggcagttccgacaggctaatggaagtgctaagaaagctgatggggattataaa
gcttcttcccctattgtacctgcttctaagatcccagccttttcccctagctctgggaaa
ggaagctctgggtctgcttctagctcagacagcactaaccctattaattcctcttcctct
aagtcttccattccttctgccctcctgaacccccatggcagccgctcctctctccatcac
ccctcctcatcctcccacatcccctctatctctaacggctctctgaggcttcagagcccc
actcacactgggaaaggtccaagtctttccatctcaccacagactcaaaacggccggcca
cccccttcctcctccgcctcctgctccccttccccagtctcctccacctccctgagtcca
ggtgtgaagagcatccggaccatacacacacccagcttcatcagctacaaggggcacaac
gggaagcccactccatcttcttcatctgccaaggaatcagcccaaaaccacacctaa
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