Polyodon spathula (Mississippi paddlefish): 121314518
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Entry
121314518 CDS
T07273
Name
(RefSeq) ras-responsive element-binding protein 1-like isoform X1
KO
K20210
ras-responsive element-binding protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121314518
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121314518
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_6
zf-H2C2_5
zf-met
zf-C2H2_jaz
zf-Di19
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
121314518
NCBI-ProteinID:
XP_041103823
LinkDB
All DBs
Position
4:complement(38628362..38691165)
Genome browser
AA seq
1716 aa
AA seq
DB search
MSRRKQPNPNKVKLMENAAEAKADVEVTPATALAGESTNQKESLATAQAGKDSGGKNCKS
LTPANENGVGPSSSDGVDLSSINAMMSTVMGVGTIDGNSENSPLKTPTKSPGPNRTGRRN
QETKEEKSSFICPLCEKNCMTQHQLTMHIRQHNSDSGGADHSCSICGKSLSSASSLDRHM
LVHSGERPYKCSVCGQTFTTNGNMHRHMKIHVKDPSTAAPSPPSPMKRRRLSTKRKLSHE
GEPVKEEEPLNKKVAAESLADEQETKADKELLHCPICFKTFICKYGLETHMETHPDTTPR
CDLCCITFRTHRGLLRHNVVIHKQLPTDPSGKPFIQNNPLLPVGFNDLAFIDFSCRKFPN
IAQVWCETNLRRCTSKFHRFVCETCNKAFPLQSALGLHLETHKGPQEGGKTKPKKDSSAQ
VEKKSFMASLGLQHISEVKPAEEDEMCAELENIKVIRVEPPKSNLPQEANCATGMNLPLP
SQFAQNNMNVLSLQPFQKGFIIHPDNNIVVKPISIESGVELADIQQILKISSSAPTHISL
PPLSQAPPTLTQSIYKQMPTLKPKPLVTPRTMVTASTPPPLMNAQQASPGCISPSLPPPP
LQLLKSPVESSSSNESLQHQPVQEPNSSQLQVKTEPTEMKTQLEKDSIIDALMPMEVERK
IKQEVSEEDLKAIMAETASKKGSCVRKGVYPCRFCDQVFAFSGVLRAHIRYHLGISPYQC
NICDYIAPDKATLIRHLRTHSGERPYICRICHYPFSVKANCERHLRKKHMKVTRKEIEKN
IEYVSCSTTDLPETMCTVPETACRYCGNDLKNYRALQIHMRTHNGCQKKPFECKECGAAF
LAKRNCIHHLLKQHPQVQEKEIEDHISTTDPTAEVNKAGSPTPNPNPSEQSSYPLPQNGL
VSGGFIPHPIKIEPVSCFSADLDQPLDFSNKSKSSGFVTIQQESRIHSPQLSRFHDSSME
PIDLSIPKSTGKMTAESPTEIKKEQPSSVTDYLFPSHTVFLGKSDLDKPMVAKNSQATLQ
APFQLSLPMASSVVINNSTLLRPIRPKPLPSKPGMSKELPPLASIAQIISSVSSAPALLK
REAPTASTNAVSGTPETEKNAKLKGLLSVTPMHSDAPNDPSLLADSPDASQDDSPLCMSK
KRGKKRATRNKPKATSTNVVDLESSGEFASIEKMLATTDTNKFSPYLQCTSDIKEEMDRR
NMSSEDEKEVPDEKLMKGKKNAYSNSLQKITCPFCPRVFPWASSLQRHMLTHTGQKPYPC
PKCDAYFSTKSNCERHLLRKHGVANRSLRRNGAIPKSKVDDEGSQESAESNSEPELTSED
VLDLTTCQKEHAECLQGNSENKDEPKDAAVEEQEPDEMETDPRPQTEDPEDDTQSNKSLD
LNFASKLIDFKLSEGDQSGGCSSQDDTKHTCGSCGKSFKFAATLTRHEKVHSAKGQDKGR
SGRKLTRKSAEATTDDVAQETDTFREKEAESLERTKENTLGAERESEENVSCAESASEDE
SPTEKANDEKSDEDSSNQKEPKTGGAGGTNKADKRKKICSVCNKRFWSLQDLTRHMRSHT
GERPYRCQTCERTFTLKHSLVRHQRIHQKMRGSEEEGAGSESESAHSGTSPPSENECEII
TSITTLDEPSTGTSTAAATTTTASQPSPRAEKSSEQEGEAEEAEEEMGQGQSESATKSAA
ETPSNFIQDLLDMHSKPTINHILPSNEPAPHLLEVE
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcgcaaacagcccaaccccaacaaagtcaaactaatggaaaatgcagctgaa
gccaaggcagatgttgaggttactcccgctacagctctggctggtgaatctacaaaccag
aaagaaagtcttgccacagcacaggctggaaaggacagtggaggtaagaactgtaaatct
cttaccccagccaatgaaaatggagttggacccagcagttccgatggtgtggacctgtcc
tccatcaatgccatgatgtcaacagtaatgggtgtggggacgatcgatggcaacagcgag
aactcaccacttaaaactccaacaaaatctcctgggccaaaccgcactggcagacggaac
caggaaaccaaagaagaaaagtcctcatttatttgtcctttgtgtgaaaagaactgcatg
acacaacaccagctaactatgcacattcgacagcacaactctgacagtggtggcgcagac
cactcgtgcagtatctgtgggaagtcgctgagctcagcaagctccctggatcgccacatg
ctggtgcattctggagaaaggccttacaagtgtagtgtctgtggccagacctttaccacc
aacggcaacatgcacaggcacatgaagatccatgtgaaggaccccagcactgcagccccc
agccccccctctccaatgaagcgcaggaggctgtcaaccaagaggaagctgagccacgag
ggggagcctgtgaaggaggaggagccgctaaacaagaaggtagcagcagagagccttgca
gacgagcaagaaactaaagcagacaaagaattattgcactgtcccatctgcttcaagaca
tttatatgcaaatatgggctagagacacacatggagactcatcctgataccacacccagg
tgtgacctgtgctgcatcacattccgtacccatcgtggtctgctgcgacataatgtcgtt
atccacaagcagctccccacagacccttcaggcaagccattcatccagaacaaccccttg
cttccagtgggcttcaatgatctggcattcattgacttctcctgtcgaaaatttccaaac
atcgcccaggtctggtgcgaaacaaacctgagaagatgcactagcaaatttcaccggttt
gtttgtgaaacgtgcaataaggctttccctctgcaatcagcccttggcctccacttggaa
acccacaaaggacctcaagaaggcggcaaaaccaaacccaagaaggactcttcagctcaa
gtggaaaagaagagcttcatggcatctctgggtttgcagcacatctcggaagtaaaacca
gccgaggaggacgagatgtgtgctgagctggagaatatcaaagtaatacgggttgaaccg
cccaagtctaacctacctcaggaggccaactgcgccaccgggatgaaccttcctctcccg
tcacagttcgctcagaacaacatgaacgttctgtcgctgcaaccctttcagaagggcttc
atcatccatcccgataacaatatagtggtgaagcccatctccattgagtcaggggtggaa
ctggctgacatccaacagatcctcaagatatcttcctctgcgcctacacatatcagtctt
ccccctctttcccaggcccctcccactctgacacagtctatctacaagcagatgccaact
ctgaagccaaagcctttggtgaccccccgtacaatggtgacagcctccaccccgccccct
ctcatgaatgcccagcaggcctcaccaggctgtatcagtcctagcctaccccctccaccc
ctccagctccttaagagcccagtggagtcatcctccagcaacgagagcctgcaacaccag
ccagtgcaagaacccaactcctctcagctgcaggttaagacagagcccacagagatgaag
acacagctagaaaaggacagcatcatcgatgccctaatgcctatggaagttgagaggaaa
atcaagcaggaagtgagtgaggaagaccttaaggccatcatggcagagacagccagcaag
aagggctcgtgtgtaagaaaaggagtttacccatgtcgcttctgtgaccaggtctttgca
ttctccggtgttctcagggctcacatccgctatcatctgggcatctcaccttaccagtgc
aacatctgtgactacattgcccccgacaaggctacactcatccgccatctgcgtacacac
agcggagagaggccctatatctgccgcatctgccactaccccttcagtgtcaaagcaaat
tgcgaaaggcacctacgcaagaaacatatgaaggtcacgcgcaaggagattgagaagaac
attgagtatgtgtcctgctccacaactgacctgcccgagactatgtgcaccgtccctgag
actgcttgccggtactgcgggaatgacctcaagaactaccgggctctgcaaatccacatg
agaacccataacgggtgtcagaagaagccatttgagtgtaaagagtgtggtgctgccttc
ttggccaagaggaattgtattcaccacctcctcaagcaacaccctcaagttcaagaaaaa
gagattgaggaccacatctctaccacagatccgactgctgaagtgaacaaggctgggtcc
cccacacctaaccccaaccccagtgagcagtcatcctaccctcttccccagaacggactg
gtttcgggtggttttatcccgcaccctatcaagattgagcctgtgagctgcttctctgca
gacctggatcagcctctggatttttccaacaagagcaaaagctctggatttgttaccatc
cagcaggagagccgcattcactcgccccagctctcccggtttcatgacagttccatggag
cccattgacctctctatcccaaagagcactggtaaaatgacagcagaatcaccaacagag
attaagaaagagcagccctcgtctgtgactgactatctcttcccatcccacacagttttc
ctagggaaaagtgacctggacaaacccatggtggcgaaaaattcccaagccactttacaa
gccccatttcagctctctcttcccatggcttcttcggttgtgattaacaactccacactg
ctacgacccataaggcccaaaccattgccgtctaagcctggcatgtcaaaggagttaccc
cccttggcttccatagctcaaatcatctcctctgtgtcctctgctcctgccctcctgaag
agagaagctcccactgctagtaccaatgcagtcagtggcaccccagaaacagagaagaat
gcaaaactgaagggactgctctcagtcactccaatgcactctgatgctcctaatgatccc
agtctgttggccgacagcccagatgcttcccaggatgactctccattgtgcatgtctaag
aaaaggggcaaaaagagagcaacaagaaacaaacccaaagccaccagcaccaatgtggtg
gacctggagtccagtggagagtttgccagcatcgagaagatgcttgcaaccactgacacc
aataaattcagcccatatctgcagtgcacctcagacatcaaagaagagatggacaggagg
aatatgagcagcgaggatgagaaggaggtgccagatgaaaagcttatgaaagggaagaag
aatgcctattccaactccctacagaagatcacctgtcccttttgccccagagtctttcca
tgggccagctcactgcagcgccatatgctgactcatacaggccagaagccctacccctgt
ccaaagtgtgatgcctatttttccaccaagtctaactgtgagcgccacctgttgcgtaaa
catggagttgccaatcgctcgttgagaagaaatggcgcgatccccaaatctaaagttgat
gatgaaggatcacaagaaagtgcagagagtaattcggaaccagaattgacatcagaagat
gtactcgatctgaccacttgtcaaaaggagcatgcagagtgtctgcaaggaaattcagaa
aacaaggatgaaccgaaggacgctgctgttgaagagcaagagcctgatgaaatggagact
gaccccaggccccagacagaggacccagaagatgacacccaaagcaacaaaagcctggac
ttgaattttgcaagcaagctgattgacttcaagctgtctgaaggagaccagagtggtggc
tgcagttcccaagatgacacaaaacacacatgtggcagctgtggaaagagcttcaaattc
gctgctacgctgacccgccatgagaaagtgcactcagccaagggccaggacaaaggcagg
agtgggagaaaattaaccaggaagtctgctgaggctactacagatgacgtggctcaggag
acagatacattcagggagaaggaggctgagagcctggaaagaacaaaggaaaacaccttg
ggagctgaaagggaaagcgaggagaacgtcagctgtgcggagagtgcttcagaggatgag
tcgccgacagagaaagcaaatgacgagaaaagcgacgaagacagcagcaaccagaaggaa
ccaaagacaggtggggccggaggaacaaataaagcagacaagaggaagaaaatctgcagt
gtttgtaacaagcgattttggtccctgcaggatctgacacgacacatgagatctcataca
ggtgagagaccctacagatgccagacgtgtgagcgcactttcacactgaagcacagcctg
gtgcgacaccagcgcatccaccagaagatgcgtgggagtgaagaggagggggccggcagc
gagagcgagtcggcacacagtggcaccagcccaccctctgagaacgagtgcgagatcatc
accagcattactaccctggatgagccgtcgacaggcacctcgactgccgccgccaccacc
accaccgccagccagccttcacctagggctgagaaatcctcggagcaagagggggaggca
gaggaggcggaggaagaaatggggcaaggtcagagtgagtctgcaaccaagtctgccgct
gagacaccaagcaacttcattcaagatctgctggacatgcacagcaagcccactataaat
cacatccttccatccaacgagcctgcaccacatcttttggaagtagagtga
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integrated database retrieval system
