Polyodon spathula (Mississippi paddlefish): 121326215
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Entry
121326215 CDS
T07273
Name
(RefSeq) core histone macro-H2A.2
KO
K11251
histone H2A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03082
ATP-dependent chromatin remodeling
pspa04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121326215
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121326215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121326215
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121326215
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
121326215
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121326215
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
CBFD_NFYB_HMF
Clp_N
DUF1764
Motif
Other DBs
NCBI-GeneID:
121326215
NCBI-ProteinID:
XP_041125375
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All DBs
Position
13:23552816..23590091
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AA seq
375 aa
AA seq
DB search
MSARGGKKKSTKQSRSGRAGVIFPVGRMMRYLRRGTHKYRIGMGAPVYMAAVIEYLAAEI
LELAGNAARDNKKGRITPRHILLAVANDEELNQLLRGVTIASGGVLPRIHPELLAKKRGA
RGKVDTQSSPPEKKARKASAVKNTKKPVVKKLGKSKSARKTREKHAENNKEGASSSTTED
GPGDGFTVLSSKSLFLGQKLSLTQSEIHNIGSIKVEGIINPTNADIDLKEDVGNALEKAG
GKEFLESVKELRKSHGPLEVAGAALSQANGLPAKFVIHCNIPQWGSDKCEEQLEKTVKNC
LSAAEDKKLKSVAFPSFPSGRNGFPKQTAAQLILKAISNHFVSSTSSSLKNIFFVLFDSE
SIGIYVQEMAKLDAK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcccgagggggaaagaagaaaagcaccaagcagtctcggtctgggcgggccggg
gtcatcttccctgtgggcaggatgatgaggtacctgcggcgggggacacacaagtaccgc
atcggcatgggtgctcccgtctacatggcagcagtgatcgagtacctggcagctgaaatc
ctggagttggcaggcaacgcagcgagggacaataagaaaggcaggatcaccccgcgccac
atcctgctggccgtggcgaatgacgaggagctcaaccagctgctgcgaggggtcaccata
gccagcggtggggtccttccccgaatccaccctgagctgctagctaagaagcggggcgcc
cggggcaaagtggacacgcagtcctccccgcccgagaagaaggcaaggaaggcatcagct
gtcaagaacaccaagaaacctgtcgtcaagaagctgggcaagagcaaatcggccaggaaa
acgagggagaagcatgctgaaaacaacaaggagggggcctccagctccaccacagaggat
gggcctggcgatggcttcactgtactctcatcaaagagcctcttcctggggcagaagctg
tccctgacacagagcgagatccacaacattggatccattaaagtggaggggatcatcaac
ccaacgaatgcagacattgatctcaaggaggacgtggggaacgcgctggagaaagctgga
ggaaaggagttcctggaatctgtgaaggagctccgcaaatcccacgggcctctggaagtg
gcgggagcggccttgagccaagcgaacggcctgccggccaagtttgtgatccactgtaac
atcccccagtggggctccgacaagtgtgaggagcagcttgagaagacagtcaagaactgc
ctgtcagccgccgaagacaagaagctcaaatctgtcgccttcccgtccttccccagtggc
agaaatggttttcctaagcagactgcagcccagctgattctgaaggccatctccaatcac
tttgtctcgtcaacatcttcctccctgaaaaacatcttctttgttttattcgacagcgag
agcatcggaatctacgttcaggaaatggcaaaactcgatgccaagtaa
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