Pseudohongiella spirulinae: PS2015_1003
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Entry
PS2015_1003 CDS
T04158
Name
(GenBank) Putative Extracellular solute-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pspi
Pseudohongiella spirulinae
Pathway
pspi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pspi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PS2015_1003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspi02000
]
PS2015_1003
Transporters [BR:
pspi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PS2015_1003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
gp12-short_mid
Motif
Other DBs
NCBI-ProteinID:
ALO45672
UniProt:
A0A0S2KBJ5
LinkDB
All DBs
Position
1075634..1077394
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AA seq
586 aa
AA seq
DB search
MTDLTGLTGKRPAFRHLQTWSLSRYFVLLCLTSITLLLSACSPGGGGYVDNAPPADPGQP
VYGGHLRVALEGETNNWLPGRGNHVAPAALTVAMALFDPLVRLDHEGRFQPYLAESVTPN
ENFDVWTVRLRPGVQFHDGTALDAEALKWNFDNLHKRQGSVTFGSIRDIDRMEIVDDLTV
NYFLTRSVVPFPDMLTRAVGWPVSPTAVQRYGEEAGLYPVGTGPFQLVEWRRDDRLELRR
NDNYWREGLPYLDAITFRPLPDEDARVASLISGDMDVVQTLRQHIVDRLRRMSGIYLYEQ
LGNSSGSAIFNAHRPPVDDYRVRQALAWAVDPEALVEVLGGRGISPVQTQYFNEDSVWYS
PRVAAAWPQKDQQRARELVSEYINDPQRSDGLAVGEPIALELMCLPEQSLVDLAQMYQAL
WNAVGFDVRLRQVEQATQIQSVISGDYMTTCWRTSNEQDPYIILNNDFGPPDVQPLNYTN
FTHPLIDEKLTVLRTEPDFDKRKAAVEEVMMLLTEQVPNTWTGSTPSAVATQPRVRNIKD
WTFPDGRLGDGMPVAQVSWAQVWMLDEESWLAEQAAVSAAAEEAGE
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
gtgacggacttaacaggcttgaccggcaaaaggccagccttcaggcatttgcagacatgg
agcttgtcgcgatatttcgttttgctctgtctgacttccatcactttattattgtctgcc
tgctcccccgggggcggtggatatgttgacaacgcgccaccagcagatcctggtcaacct
gtctatggcggccatctgcgtgttgcgctggaaggcgaaaccaataactggctgcccggg
cgaggtaatcatgtggcacctgccgctttgacggtggccatggctttgttcgatccgctt
gtccgactggatcatgaaggtcgttttcagccctatctggcagaatccgttacccccaat
gaaaactttgatgtctggactgtcaggctgcggccaggtgtgcagtttcacgacggaact
gcgctggatgcggaagccctgaagtggaacttcgacaatctgcacaaacggcaagggtct
gttactttcgggtcgattcgtgatatcgatcgcatggagattgttgacgacctgaccgtt
aattatttcctgacgcgcagcgtggtgccgtttcccgatatgctcacgcgggctgtcggc
tggccggtatcacccacggccgtgcagcgttacggcgaagaagccgggctgtatccggtt
ggcacaggcccctttcaactggttgagtggcgccgcgatgaccggctggaactgcggcgt
aatgataattactggcgtgagggtttgccttatctggatgccatcaccttcaggccgctg
ccagatgaagatgcccgcgtagccagtctgatttccggcgacatggatgttgtgcagaca
cttcgccagcatattgttgatcgcttgcgacgtatgtccggcatctatctctacgagcaa
ttgggcaacagcagcggcagtgccatctttaacgcccaccgcccgccggtggatgattac
agggtcagacaggcgctggcctgggcggtagatccggaagcgcttgtggaagtgttgggt
ggccgggggatttccccggtgcagacgcagtactttaatgaagacagcgtctggtactcg
ccaagggttgcggcggcctggccgcaaaaggatcagcaacgtgccagggagctggtcagt
gagtacattaatgatccgcagcgctcagatgggctggcagtaggcgagccaattgctctg
gagcttatgtgcctgccggagcagagtctggtggacctggcgcagatgtatcaggcgctc
tggaatgcggtaggatttgatgtgcgactgcggcaggttgagcaggcaacacagattcag
agcgtgatcagcggcgactatatgaccacctgctggcgaaccagtaacgagcaggatccc
tatattattctgaacaacgattttggcccgccggatgttcagccgctgaactacaccaat
tttacgcaccctttgatcgatgaaaagttgactgtgctgcgcacggagccggatttcgac
aagcgcaaggctgccgttgaagaggtcatgatgttgctcaccgagcaggtacccaatacc
tggaccggatccacgccttcggccgtcgccacccagccccgtgtacgaaatatcaaggac
tggacttttccggacggtcgtcttggcgacggcatgccagtggctcaggtaagctgggcg
caggtgtggatgctcgatgaagagagctggctggcggaacaggcggctgtcagtgccgca
gcagaggaggctggtgagtga
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