Paenibacillus spongiae: L1F29_20135
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Entry
L1F29_20135 CDS
T09530
Name
(GenBank) SNF2 helicase associated domain-containing protein
Organism
pspn
Paenibacillus spongiae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
ResIII
SWIM
DEAD
Motif
Other DBs
NCBI-ProteinID:
UVI27768
LinkDB
All DBs
Position
complement(4459261..4462557)
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AA seq
1098 aa
AA seq
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MSIQLTEQDVIGLCGELAYKKGLASLRRGKVAITSSNAEWTRFDAKVNDNGFDQVSIELD
QDGVVEARCSCSALFTFDKYCKHIAAVLLNIQALRRGSETTKQADTSLLQPGDHKHGHQD
SSTDSDNLQLLNGLLGLFGGRPLRPRSAAHRFDTREPLDVEFMCKPYFCGYRKLMFGIEM
KVGPKRLYIVQDIRAFLDRIDRGEVYTFSRHFTYDPELHSFPKETDAVIRQLIHIIQNET
MYLDTVSSYPIHSASNKGSDRILPVPPVSWETLLPLLIDAPSVRVEQESGIYEGIRITDE
RLPLQFEFDQDAANGYRLDIKGLDGITVMESYSIVLFEGKLLKLPAEQCKRLTELKGMLD
TSARQQVKIRPEMIETFMEKVIPGLMRMGKVHIAEAVSNRIIQTPLKAKLYLDRVRDRLL
AGLEFQYGSIIINPLDDNAQKRHGGHILMRDGELERRILELMDQHTITRTEAGYFMDDEE
AEFDFLHNTVPQLEKLLTVYATSAVKVRLHKGPVHPKITVDVDERTDWLEIKFDMGGIPE
TEIRKLLQSLEEKRRYYRLPNGALLPLEAEELQEMIRFLNEVGIRNEDIVGSQFRLPVVR
GLHMMDADRSGNTVKLGRSFRRLLDNMRSPDNLDFPVPGNLEPILRDYQKYGYQWLKTLA
HYRFGGILADDMGLGKTLQSIAFVVSVLTEIRQEGRPAIIVAPASLVYNWRNEFAKFAPG
IKTVIVDGSRTERSRLLKDMTHTDVVITSYPLLRRDAELYVKHAFHTLFLDEAQMFKNHT
TQTAQTVKLIQARYRYALTGTPMENRLEELWSIFDVIFPGLFPDLKGFHDLSREAVARRI
RPFLLRRLKSDVLKELPDKIETLQASELLPEQKKLYVAYLAKLRQETVKHLNDDSFQQNR
IRILAGLTRLRQLCCHPALFVDDYAGSSAKFEQLQEIVEECRNAGRRVLVFSQFTQMLGL
IGRELGVQGVPYFYLDGQTPGSERVELCTRFNDGERELFLISLKAGGTGLNLTGADTVIL
YDLWWNPAVEQQAADRAHRIGQQNVVQVIRLVAQGTVEDKMFDLQQRKINLIDEVIRPGE
EALSGLTEQDIREILMIE
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgagtattcagttaacagagcaggatgtgatcgggctgtgcggcgaactcgcgtataag
aaggggctggcttcccttcgacggggaaaagtcgcgattacgtcaagtaatgccgaatgg
acccgattcgatgcgaaggtaaacgataatggattcgatcaagtcagcatcgagttggat
caggacggagtcgtggaggcgcgatgcagctgctcggctttattcacatttgataagtat
tgtaaacatatcgcagccgtattgctgaatattcaagcgcttcggcgaggcagcgagaca
accaagcaggcggatacttcgcttcttcagcctggagatcataagcacggccatcaggat
tcaagtaccgactcagataatttgcagctattgaacggcctgttggggctgttcggaggg
aggccgctgcggccgagaagcgcagcgcatcgcttcgataccagagagccgctggatgtg
gagttcatgtgcaaaccttatttctgcggctatcgtaagctgatgttcggcatcgaaatg
aaggtcggacccaagcggctgtatatcgtacaggacatcagagcgtttctggaccggatc
gaccgcggagaagtctatacgttctccagacattttacctacgatcctgagctccacagc
ttcccgaaagaaaccgatgcggtgatcaggcagttgattcatattattcagaacgaaacg
atgtatcttgatactgtaagttcttatcctattcattcggcatccaataagggaagcgat
cggatactgccggttccccctgtctcgtgggaaacgcttctgccgctgttgatcgatgcc
ccttcggtacgcgtggaacaggagagcggcatctatgaaggcattcggataacggacgag
cggcttccgctccaattcgagtttgaccaggacgcagccaatggttaccgattggacatc
aaaggattggatggaattaccgtcatggaatcttacagcatcgtcctcttcgaaggaaag
ctgttaaagctgcccgccgagcaatgcaagcgcttgaccgaactgaaggggatgctggat
acgtccgccaggcagcaagtgaagattcggccggagatgatcgagaccttcatggagaag
gttatccctggacttatgaggatgggcaaggttcatattgccgaggccgtttcgaaccgt
attattcaaacgccgctgaaggcgaagctctacctggaccgtgtcagggaccggctgctc
gccggactcgaatttcaatatggcagcatcatcataaatccgttagacgacaatgctcag
aagcgacatggagggcatatcctcatgcgggacggggagcttgaacggcgaatcttggag
ctaatggaccagcatacgatcaccagaacggaagccggttatttcatggacgatgaagaa
gcggaattcgattttctgcacaataccgttccgcagctggagaagctgctgacggtatat
gcgacgtcggccgtgaaggtaaggctccataaaggtcctgtacacccgaagataacggta
gatgtagatgagcgaaccgattggctggaaattaagttcgatatgggcggcattccggag
acggagattcgcaagctgctgcagtctctcgaggagaagcgccggtattaccgtctgcca
aacggtgctctattgccgctggaggccgaggagctacaagaaatgatccgattccttaac
gaggtcggcattcggaatgaagatattgtagggtcccaattccgacttcccgttgtccgg
ggcctgcatatgatggatgccgaccgttcggggaatacggtgaagctgggccgatcgttc
cgccggctgctggacaacatgagaagtccggacaatctggactttcctgtccctggcaat
ctcgagcctatactccgcgattatcagaagtatggctaccaatggctgaagacgctcgct
cattaccgcttcggaggcattcttgccgacgatatgggcctcggcaagacgctgcagagc
atcgcctttgtcgtgtctgtcctgacggagatcaggcaggaaggccgtccggctatcatt
gtcgccccggcttctctcgtctacaactggcgcaacgaatttgcgaaattcgcacccgga
attaaaacggttattgtcgatggcagccgaacagaacgcagccgcttgctcaaagatatg
actcacacggatgtcgtcatcacatcctatccgctgctgaggcgcgatgccgagctgtat
gtgaaacatgcctttcatacgctcttcctggatgaggcacagatgttcaagaaccacacg
acgcagacggcccagacggtgaagctgattcaggcgagataccggtatgcccttaccgga
acgccgatggagaaccggctggaggagctatggtcgatctttgacgtgatcttccccggg
ctgttcccggacctgaaggggttccatgatttatcgcgtgaggcagtggccaggcggatc
aggccgtttctcctgcgtcggctgaaaagcgatgtactgaaggagctgccggacaagatc
gagacgctgcaagcatccgagctgctgccagagcagaagaagctgtatgtggcgtatctg
gctaagttaaggcaggaaacagtgaagcatctgaatgatgacagcttccaacagaaccgg
atcagaattttagcgggcttaacccggctgcggcagctctgctgccatcccgctctattc
gtggacgattatgcaggcagctcggccaaattcgaacagctgcaggagatcgtcgaagag
tgccggaacgcgggcaggagggtactggttttctcgcaattcacacagatgcttggcctg
attggacgggagctcggcgttcaaggcgttccttatttctacttggacggtcaaacgccc
ggctcggagcgcgtagagctatgcaccagatttaacgatggggagcgcgagttgttcctc
atctccttgaaggcaggcggtaccgggctgaacctgacaggcgcagacaccgttatcctc
tacgacttatggtggaatccggctgtcgaacagcaggccgccgaccgagcacatcggatc
gggcaacagaacgtcgttcaagtaatccgtctcgtcgcccaagggactgtcgaggataag
atgttcgatctgcagcagcggaagatcaatctcatcgatgaggtgatccgtccgggcgag
gaagcattgtccggactgacggagcaggacatccgggaaattctgatgatcgaataa
DBGET
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