Paenibacillus spongiae: L1F29_26815
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Entry
L1F29_26815 CDS
T09530
Name
(GenBank) PKD domain-containing protein
Organism
pspn
Paenibacillus spongiae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
Laminin_G_3
F5_F8_type_C
Big_1
Big_13
Big_7
BiPBP_C
Sad1_UNC
MG4
XRCC1_N
Motif
Other DBs
NCBI-ProteinID:
UVI29019
LinkDB
All DBs
Position
complement(5966830..5971704)
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AA seq
1624 aa
AA seq
DB search
MVIILRKFLATILCTVLLLGASLPAAGASGLGQWISWTDQGDAYKTFGANANITIHTGKM
QIIPHCPEGIADGINSWTDLYIVESGSLSILSDGKELEDVGGGGPNAVMALSSGIFISET
IGYTGPDGKIPPGEYAIVFDECQDGKFNYLIDGVIDPAFKVEYTTGVVPPLDLTELKEAA
EKEAKRWEKYKKYAEKLFALQKAADAGRNPNEKFVDFLMRSGLQDPRTMATLQLANQAKH
YQGIADDPPDPDFKHVTPLGERPILDFQSNHPLDLAMQSLANEAANEQAITRQLWTLLER
YQGAQAAGDTNWALTHAMALNDNIDLLLNQLQRTSQRVSQFNQALSADGEPLNDKAAGLE
QLRTRVAASGFTADEIQYLRNLNMSDAEIDQFKSQFIAGDFAFTKQEMLAEGSGIVSDNN
VLGATLVTFGSHIVDVINQLLNDPTVRNDDPVAKAGGPYTANEGTAVALNGAASTSTAGI
TAYEWDLNGDGVFGDAQGAAVSHTFMTSFQGYIGLKVTDAAGKQAVDYAKATIADVNRAP
VITAQSPANRQVEQYIGKAETFSVSAADPDNDPISTEWFVDGVSSGSGSSFTYRPAAAGI
HTIEAVVTDGSLLGGAVRVDWTAKVLRSMPAALTLSPQSKTVRVGAVHTLTAAVLDDQGL
GVAGVPVTMTISGANPASYTAATDNNGVAAFSYTGTKTGDDQAIARAAGLTSPAAGVRWT
TADETPPVTTAALTPAVPDGVNGNYKSPVSITFTAEDDSGIEKTEYRIDGGEWQTYQSAP
IVVSVEGAHTVEYRSIDLIGNVEATKQVSFTIAQPKQPQALFYPAGPGKNVALLEERAKV
EAVSSNYDSGHSAENMLKFTYHNPWATRVKDNQWVKISLADGNPYLIDRIQIRPRPSFAD
QRVKDFEVAVSTTTLDDAAFTTVIKSATANNGDLQEFKLPKPVWAKYILYRPLTNHGNSS
VTSTQQFKVKTGLIGGQTVTFQNLSTDEDNDIVSWKWEFGDNSPISAEKEPTHTFPGPGT
YPVKLTVTDSQGHTSSYTLEQTVEPADFEFMPQNPKEGETVTFVNTTAGSDDGFITSSKW
LFGDSSTTTGMPVTHSYNDNKTYPVTLETVTKDGNVHRVTKDITTTNVPPAVRVGDGATL
LGGQNYRTGIQISDPGGADKHTCHWDFGDGTTSSLCTFDHAYPVMEKDAPDKQYEAVVTV
RDDDGGEAKASMTFITRAEQTPRQIAFYTFDDTFDDFSGNGNHGKPAVGNPTFAEGIVGK
AAKFDGRSGVTVEDSDSLDLSTNFSFSMWLYKEDAGSGGYAPILTKGNTSDYGPYSFLHD
PSGKSPGVRLVSGDRPGYTHLFPDTPVGFKEWYLSTVTWDGKIIKYYINGELRATREWAG
VFKNTTEKVTIGFDPPGATEYFRGLMDDFRIFNYPLTEKEIDELYDRKNPDVVPPVTTAV
STSASGPDPVSGWHRSDITITLTATDDSSGVKLTEYRMNGSEWKAYTAPVVLPQDGVYTF
EYRSTDQAGNVENPQSMELKLDKSAPITRYHFDPIMAVNKAGRPYISGFTVTLRAEEPVS
GSGIRGTLYRINGGAWMPYTGSFTAMAGTTHIVEYYSTDQAGNPEVVMNKMDFAKGIFTG
AGSF
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
gtggttatcatcttacgcaagtttctagcaaccatcctctgtacggtgctgctgctcggg
gcaagtcttcccgctgcgggcgcgagcgggctcggccaatggatctcgtggacggatcaa
ggcgatgcctacaagacgttcggagcaaatgccaatattacgattcataccggcaagatg
cagatcatccctcattgccccgaaggcattgcagatggcatcaattcttggaccgacctc
tacatcgtagagagcggaagtctttcgatactgtccgacggcaaggagcttgaagatgtc
ggaggcggcggccccaacgccgtcatggcattgtccagcgggatcttcatctcggagacg
atcgggtatacagggcccgatggtaaaatcccccctggagagtatgcgattgtattcgat
gaatgccaggacggcaagttcaactacctgatcgacggcgttatcgacccggccttcaag
gtggaatatacgacgggcgtcgttccgccgcttgacctcacggagctgaaggaagccgca
gagaaagaagcaaagcgttgggaaaagtataagaagtacgcggaaaagctgtttgccctc
cagaaagccgccgatgccggcaggaatccgaatgaaaagttcgtcgatttcctcatgaga
agcggcctccaagacccccgcacaatggcgacgcttcaactagccaaccaggcgaagcat
taccaaggtattgccgatgatcctccggatccggacttcaagcatgtcactcccctcggc
gaaaggccgattcttgattttcaaagcaatcatcctctcgatctagccatgcaatcacta
gcaaacgaagctgcgaacgagcaagccatcacccgccagctgtggacgctgcttgaacgt
tatcaaggcgcgcaggcggccggcgacacgaattgggcgttgacccacgcgatggcattg
aatgacaacatcgatctgctgctcaatcaattgcagcgcacgagccagcgcgtctcgcag
tttaatcaggcactatctgcggacggagaaccgttgaacgacaaagccgcagggctggag
cagctgcgtacgcgagtagccgcctccgggtttacggctgatgaaatccaatacttgcgc
aatttgaacatgagcgatgccgagatcgaccaattcaagtcacaattcatcgccggggat
ttcgccttcacgaagcaggagatgctggctgaaggttcgggtattgtgagtgataataac
gtgcttggtgcgactttggtgacgttcggctctcacattgtcgatgtcattaaccaactg
ctcaacgatccgacggttcgcaatgatgatccggtcgcgaaagcaggagggccctatacc
gcgaatgaaggaaccgcggttgcgctgaacggtgccgcttcgaccagcaccgccggcata
acggcatacgaatgggatttgaacggcgacggcgtattcggggatgctcaaggcgcagcg
gtctcacatacgttcatgacgtccttccaaggttatatcggattgaaggtaaccgatgca
gccggcaagcaagcggttgactatgcgaaagcgacgatcgcagatgtaaaccgtgcgcct
gtcattacggctcaatcaccggccaatcgccaagtggagcagtacatcgggaaggcggag
acgtttagcgtatcggccgcggatccggataacgatcccatatcgacggaatggttcgta
gacggcgtctcttcgggcagcgggagctcgtttacataccggccggcagctgcgggaatt
catacgattgaagcggtcgtgaccgacggaagcctgctgggcggagcggtacgcgtcgac
tggacagcgaaagtgctccggtcgatgccggctgccttgacgctttcgccgcagagcaag
accgtgcgggtcggcgcggtacacacgcttacagcggctgttcttgacgatcaaggcctt
ggcgtggcgggagtgccggtgaccatgacgatatccggggcaaatccggcctcatatacg
gcagcgaccgacaacaacggcgttgcggctttcagttataccggcacgaagacaggcgac
gaccaagcgatagcccgggcggctggacttacttcgccggcagccggcgtacgttggacg
acagcggatgagacgccgccggttacgacagccgcgctgactcctgccgtccctgacggc
gtgaacggcaattataaatctcccgtctcgatcacattcacggcagaggatgacagcgga
atcgagaaaaccgaatatcgcattgacggcggagaatggcagacttatcagtcggcgcca
atcgtcgtatcggtcgagggggcccatacggttgaataccggagcatcgacctgatcggc
aacgttgaagcgacgaagcaagtttcgttcaccattgcccagccgaagcagccgcaggcg
ttattctatccggccggccccgggaagaacgtcgctttgctggaagagcgcgcgaaggtg
gaagccgtatccagcaactacgacagcggccacagtgcggaaaacatgctgaagtttact
taccacaacccttgggcgacacgggtgaaggataatcagtgggtgaaaatcagtttggcc
gacggcaacccgtacctgatcgaccgaattcagatcaggccccgcccgtcttttgcagac
cagcgggtaaaagatttcgaggttgccgtctcgacgacgaccttggatgatgcggcgttt
acgaccgtcatcaaatcggcgaccgccaacaatggtgatctgcaggaattcaagctgcca
aagccggtgtgggccaaatatattctataccggccgcttaccaatcatgggaacagctcc
gtgacttccacccagcagttcaaagtgaaaaccggtttaattggcggccaaacggtcacg
ttccagaacttgtccacggatgaggataacgacatcgtgtcctggaagtgggaattcggc
gacaacagtccgatcagcgcggagaaggagcctacgcataccttcccgggtcccggaacg
tatccggttaagctgaccgtaaccgattcccaaggacataccagcagctacacgctggag
cagacggtcgaaccggccgacttcgaatttatgcctcagaacccgaaggaaggggaaacc
gttaccttcgttaataccacggcaggcagcgacgatggtttcataacgtccagcaagtgg
ttgttcggagattcatcaacgacaacgggaatgcctgtaacgcatagctacaacgataac
aaaacctatcccgttacgctggagactgtgacgaaggatgggaacgtgcatcgggtcacg
aaggacatcacgacaaccaacgtgccgcctgccgttagggtcggggatggcgcgaccttg
cttggcgggcagaactataggacgggaatccagatctccgatccagggggagcggataag
catacgtgccattgggacttcggagacggaaccacttcatccttatgcaccttcgatcat
gcctatccggtcatggagaaggatgcgccggataagcagtatgaggccgtcgtaacggtg
agggacgatgacggcggcgaggcgaaagccagcatgacgttcatcacccgcgcggagcag
actccaagacagattgcgttctatacgtttgacgatacgttcgatgacttctcgggcaac
ggcaatcatgggaaacccgcggtagggaatccgacgttcgccgaaggaatcgtcgggaaa
gccgccaaattcgacggaagaagcggcgttacggtcgaagacagcgattcgcttgatttg
tctacgaacttctccttctcgatgtggctttacaaggaggatgcgggatctggaggctat
gcgccgatattgaccaaagggaacacgtccgactatgggccgtattccttcttgcacgat
ccttccggcaaatcgccgggcgtgcggctggtcagcggcgatcgtccgggatacacgcat
ctcttccccgatacgccggtaggcttcaaggaatggtacttatccacggttacatgggac
ggcaagatcatcaagtactatattaacggggaactgcgggccaccagagaatgggcgggc
gtattcaagaatacgaccgagaaggtgacgatcgggttcgatcccccgggagcaacggaa
tatttccgcgggttgatggatgatttccggatattcaactatcctctgaccgagaaagaa
atcgatgagctgtacgacaggaaaaatccggatgtcgtgcctcccgttacgacagccgtc
tccacatcggccagcggcccagatcccgtatccggctggcataggtccgacatcacgata
acgctcaccgccacggacgacagctccggggtgaaattgacggaataccggatgaacggc
agcgaatggaaggcttatacggcgcctgtggtgctgccgcaggacggggtatataccttc
gaataccgcagcaccgatcaggccggcaatgtcgagaacccccaatcgatggagctgaag
ctcgataaatcggccccgatcacgcgctatcacttcgatccgatcatggccgtcaataaa
gccggaagaccgtacattagcgggtttacggtcaccttgcgggcagaggagccggtcagc
gggtccggtataagaggaacgctgtatcggattaacggcggcgcctggatgccgtatacc
ggttcattcacggccatggccggtactacgcatatcgtggaatactacagtaccgatcag
gcagggaatccggaagtcgttatgaacaaaatggactttgccaaaggcatcttcacaggt
gcgggatcattctaa
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