Pandoraea sputorum: NA29_02590
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Entry
NA29_02590 CDS
T03554
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pspu
Pandoraea sputorum
Pathway
pspu00300
Lysine biosynthesis
pspu00470
D-Amino acid metabolism
pspu01100
Metabolic pathways
pspu01110
Biosynthesis of secondary metabolites
pspu01120
Microbial metabolism in diverse environments
pspu01230
Biosynthesis of amino acids
Module
pspu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NA29_02590
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NA29_02590
Enzymes [BR:
pspu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NA29_02590
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Ortholog
Paralog
Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AJC15213
UniProt:
A0A239SYM2
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All DBs
Position
5349976..5351238
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AA seq
420 aa
AA seq
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MSDAIFSYRDDVLHAEGVALPALAERFGTPLYVYSKAALTNAYQAYAKACEGRNAAVHYA
AKANSNLAVLGVFAKLGAGFDIVSAGELARVIAAGGDPKRAVFSGVGKHADEMRFALEKD
VFCFNVESRPELDRLNAVAGQVGKRARVSLRVNPNVDAKTHPYISTGLRGNKFGVAYEEA
FDAYRAAAAMPNLEVVGIDCHIGSQITEISPYLDATDKVLDLVEKLEAAGISLHHIDVGG
GLGITYTDETPPDITAFATTLLDHIAKRGHGHRQVLFEPGRSLVGNAGVLLTRVEFLKHG
ETKNFAIVDAAMNDLARPAMYEAYHGIDPVVRRAGDTATFDVVGPVCESGDWLGRDRALA
IDAGDLLAIRSAGAYGFTMSSNYNTRPRAAEVMVDGNEAHLVRERETVESLFAGERLLPV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgccatcttctcctaccgcgacgacgtgcttcacgccgaaggcgtagcgctg
cccgccctcgccgagcgcttcggcacgccgctgtatgtctactcgaaggcggctctgacg
aacgcctatcaggcctatgccaaggcctgcgagggtcgtaacgccgcagtgcattacgcc
gccaaggccaattcgaacctcgcggtcctcggcgtgttcgccaagttgggcgcgggcttc
gacattgtttcggcaggtgagctggcacgcgtcatcgccgcaggcggagatccgaagcgc
gccgtgttttccggcgtcggcaagcatgcagacgaaatgcgtttcgccctggaaaaggat
gtgttctgcttcaacgtggaatcgcgtccggaactggatcgcctgaacgcggtggctggg
caagtcggtaagcgggcgcgcgtgtcgttgcgcgtgaatccgaacgtcgacgcgaagacg
cacccgtacatctccacgggcctgcgcggcaacaagttcggcgtagcgtatgaagaagcc
ttcgacgcctaccgcgcggcggccgccatgcccaacctcgaagtcgtcggcatcgactgc
cacatcggctcgcaaatcaccgaaatctcgccgtacctcgacgcgaccgacaaggtgctc
gatctcgtcgagaagctcgaagcggctggcatttcgctgcatcacattgatgtaggcggc
ggtcttggcatcacctataccgacgagacgccgccggacatcacggcgttcgccacgacg
ctgctcgaccacatcgccaagcgtggtcacggccaccgtcaggtgctgttcgaacctggc
cgttcgctggtcggcaacgccggtgtgctgctcactcgcgtggaattcctcaagcatggc
gagacgaagaacttcgccatcgtcgatgcagcgatgaacgatctggcccgcccggccatg
tacgaggcgtatcacgggatcgacccggtggtgcgtcgcgccggcgataccgcgacgttc
gacgtcgtcggcccggtctgcgagagtggcgattggctcggtcgtgaccgcgcattggcg
atcgacgccggcgacctgctcgccattcgttccgctggcgcctatgggttcacgatgagc
tcgaactacaacacgcgtccgcgcgccgccgaagtcatggtcgacggcaatgaagcccat
ctcgtacgcgaacgcgagacggtcgaatcgctgtttgcgggcgagcggcttctcccggtc
tga
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