Pandoraea sputorum: NA29_23475
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Entry
NA29_23475 CDS
T03554
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pspu
Pandoraea sputorum
Brite
KEGG Orthology (KO) [BR:
pspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspu03000
]
NA29_23475
Transcription factors [BR:
pspu03000
]
Prokaryotic type
Helix-turn-helix
Other families
NA29_23475
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_23
HTH_28
AAA_16
DUF815
Mg_chelatase
AAA
IstB_IS21
AAA_3
HTH_29
HTH_38
HTH_30
nSTAND3
AAA_22
AAA_7
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AJC19219
LinkDB
All DBs
Position
4401819..4402949
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AA seq
376 aa
AA seq
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MPAAPAPAQASHQLRPDYLAIDDLCGTDARMRDLLARGKRFVDRGLPVLILGETGTGKEF
LARALHEYSERRRQSFVAINTASLPEHLIESELFGYQRGAFSGALPGGMKGKMQQADGGT
LFLDEIGDMPYAMQTRLLRVLSEREVTPLGASQPVPVDVQLICATHQDLASAVAQGTFRE
DLYYRIAVGVLTLPTLRERGDKCELIARMLCDEWPEMRVDQALARVTPDALSCLLTHAWP
GNLRQMRAALRYACAVMSGERVCVDDLPPELASSRTLHSTPPVNRHEEARDARIEETAHT
VSIASHTQYRAHDASHESHDQERERILQALAQHRWNISAAARTLGFCRASLYRKLKQLSI
PHVRDCGEALSTRHYA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
gtgccagccgctccagccccggcccaggcctcccatcaactcaggcccgattacctcgcc
atcgacgatctgtgcggcaccgacgcccgcatgcgcgatttgctcgcgcgcggcaaacgc
ttcgtcgaccgtggcctgcccgtattgattctcggtgagacgggcacgggcaaagagttt
cttgcccgcgcgttgcacgagtacagcgagcgacgcagacagtcgttcgtcgccatcaat
acggcgtcgctgccggagcatctcatcgagagcgaactgttcggctatcagcgcggtgcg
ttctccggcgcgttgcccggggggatgaaagggaagatgcagcaagccgatggcggcacg
ctgttcctcgacgaaatcggtgacatgccgtacgcgatgcaaacgcgtttgctgcgcgtg
ctatcggaacgtgaggtcacacccctaggggcaagtcagccggtgccggtggacgtccaa
ctgatctgcgctacgcatcaggatctggcaagcgccgtcgcacaaggcacgttccgtgaa
gacctctactaccggattgccgtcggcgtgctgacgctgcccaccttgcgtgagcgcggc
gacaagtgcgaactcatcgcgcgcatgttgtgcgacgaatggccggagatgcgtgtcgac
caggcgctcgcgcgcgtgacgcccgacgcgctctcgtgcctgctcacgcatgcgtggccg
gggaatttgcgtcagatgcgcgcggcattgcgatacgcgtgtgccgtgatgagcggggaa
agagtgtgtgtggacgatctgccgccggaacttgcgtcgtcgcgtacattgcattcgaca
cctccggtgaatcgccacgaagaggcgcgcgacgctcggatcgaggaaacggcccatacc
gtcagcattgcttcgcacacgcaatatcgtgcacatgacgcgtcacacgaatcacacgat
caggaacgcgaacgcattctgcaagcactcgcacagcatcgctggaacatttcagcggcc
gcgcgcacgttgggattttgtcgtgcatcgctatatcgcaagctcaagcagttgagcatt
ccgcatgttcgagactgcggcgaagccctcagcacaaggcattacgcctag
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