KEGG   Punctularia strigosozonata: PUNSTDRAFT_109122
Entry
PUNSTDRAFT_109122 CDS       T03131                                 
Name
(RefSeq) DNA helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
psq  Punctularia strigosozonata
Pathway
psq03022  Basal transcription factors
psq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PUNSTDRAFT_109122
  09124 Replication and repair
   03420 Nucleotide excision repair
    PUNSTDRAFT_109122
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psq03021]
    PUNSTDRAFT_109122
   03400 DNA repair and recombination proteins [BR:psq03400]
    PUNSTDRAFT_109122
Enzymes [BR:psq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PUNSTDRAFT_109122
Transcription machinery [BR:psq03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     PUNSTDRAFT_109122
DNA repair and recombination proteins [BR:psq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     PUNSTDRAFT_109122
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom DEAD SBP_bac_6
Other DBs
NCBI-GeneID: 18876212
NCBI-ProteinID: XP_007388989
JGI: 109122
UniProt: R7S1H9
LinkDB
Position
Unknown
AA seq 866 aa
MASKRGSEAPSDDSMRLKRPRREEESTSYVDVDDDDDASAPPTSVVPRGATINFSALTRK
LAEQRRAQQSDEHGDGSSLSKHRRQQNKLVSHIFMDQDFSWLHLKPDHAARPLWISPEDG
SIILEAFSPIAEQAQDFLVAISEPVSRPAFLHEYKITSYSLYAAVSVGLQTEDIIEVLNR
YSKVPVPESITTFIRERTLSYGKVKLVLKHNKYYVESSHPDTLQFLLKDKVIREARVISQ
QTDNSIRGNTFTTAKAPTKSNLIIPGSSEALKKKDEISGGSTSGAGDNANATNDAELFTS
VVGVDADEIDDEDDNVHSFEIDDAKIDDVKKRCNELEYPMLEEYDFRNDTINPNLDIDLK
PATVIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCFVLCTSSVSV
MQWKQQFMQWSNITDRQIAVFTADQKEKFAGESGIVISTYSMVANTHNRSHDAKKMMDFL
TSREWGFILLDEVHVVPAAMFRRVVTTIKAHAKLGLTATLVREDDKIADLNYMIGPKLYE
ANWMDLAAKGHIANVQCAEVWCPMTPEFYREYLREQSRKRMLLYCMNPKKFQACQFLIKY
HEDRGDKIIVFSDNVYALEAYAKKLGKLYIHGGTGQVERMRILQYFQHSPAVNTIFLSKV
GDTSIDLPEATCLIQISSHFGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMF
YSTKRQQFLIDQGYSFKVITHLDGLEDQPDLVYKSRDEQIELLSSVLLANESEADLGSDI
RAGEGDLAGTVTSKDFGVPTKSRAAAAAAPYRTSGSLTALSGGQHMSYIEQNKSANKKLA
REAAPRSKLFAKREKDRAAARKAARG
NT seq 2601 nt   +upstreamnt  +downstreamnt
atggcttcaaagcgcggctcagaggctccctcggacgactcgatgcgtctgaaacgtccc
aggcgagaggaggagagcacgagctacgtcgatgtcgacgacgacgatgacgcatccgca
ccgcccacctccgttgtacctcgtggagctaccatcaacttcagcgccctcactcgcaag
ctggcggagcagcgtcgagcgcagcagtccgacgagcatggagatggctcgtcgcttagc
aaacaccgcaggcaacagaacaagttggtttctcacatattcatggaccaagacttttcg
tggttgcacctcaaaccggatcacgctgcgcgcccgctgtggataagcccggaagacggg
agcatcatcctcgaggccttttccccgatcgcagagcaggcgcaggacttcctcgtagct
atcagcgagcctgtgagcagaccggcctttttgcacgaatacaaaatcacgtcctactct
ctatacgccgcagtctcggtcggccttcagacggaggatatcatcgaagtattgaaccga
tactccaaggtccctgtccccgaatcaatcaccacttttatccgcgaaaggacgctttcc
tatggaaaggtcaagctcgtgttgaagcacaacaaatactacgtcgaatccagccatccg
gacacgctccagttcctactcaaggataaagtcatccgagaagcacgcgttatttctcag
cagacggacaacagcatcagagggaacacgttcaccaccgccaaggctccgaccaagagc
aaccttatcatcccgggctcgtcggaggccctcaagaagaaggatgagattagtggcggc
tccacatccggcgccggcgacaacgcgaatgccacgaatgacgccgaactgttcacttcg
gtagtcggcgttgacgcagacgagatcgatgacgaggacgacaacgtccattcattcgag
attgatgatgcgaagatcgacgatgtgaagaagcgatgcaacgagctcgaatacccgatg
ctggaggagtacgacttccggaacgacacgatcaaccccaatctggacatcgatctgaaa
cccgcaaccgtcatcaggccctaccaggagacgagcttatcgaagatgttcgggaacggt
cgcgcgagatccgggattatagtgcttccctgtggcgctggcaagaccctcgtgggcatc
actgcggcctgtacgatcaagaaatcgtgtttcgtactctgcacatcctcagtatcggtg
atgcagtggaagcagcagttcatgcagtggtccaacatcaccgatcgacagattgccgtc
ttcaccgctgatcagaaggagaagttcgcgggcgagagcgggattgtcatttcgacgtat
tcaatggtggcgaatacgcacaataggtcccacgacgctaagaagatgatggacttcctg
acttctcgtgaatggggtttcattctcctggacgaggtgcacgtcgttcccgcggccatg
ttccgtagggtggtcactaccataaaagcccacgcgaagctgggcttgacggcgacgctt
gttcgggaagatgacaagatcgctgacctgaactatatgattgggcccaagctctacgaa
gccaactggatggatcttgcggcgaagggccatattgcaaatgtccagtgcgcggaagtg
tggtgtcctatgacgccagagttctatcgggagtacttgcgcgagcagtcgcggaagcgc
atgcttctctactgcatgaacccgaagaagtttcaggcgtgccagttcctgatcaagtac
cacgaggaccgaggcgacaagattatcgtgttctcagacaatgtgtacgcgctcgaggca
tatgcaaagaagctcgggaagctctatatccacggtggaacgggccaggtcgagcgcatg
agaatcttgcagtacttccaacatagcccggcggtcaacacgatattcttgtccaaggtc
ggggatacttcgatcgacctgcccgaggccacatgcctcatccaaatctcttcgcacttt
gggtcgcgtcgacaggaggcgcaacggctgggccgcattctccgcgcaaaacgtcgaaac
gacgaaggcttcaacgcgtttttctactcgctcgtgtcaaaggacacgcaggagatgttc
tacagcacgaagcggcagcagttcttgatcgatcaagggtactcgttcaaggtcatcacc
catctcgacgggctcgaggaccagcccgacctcgtgtacaagtcgcgggacgagcagatc
gagctcctgtcgtccgtcctgctggcgaacgagagcgaggccgatctcgggtcggatatc
cgggcgggagaaggcgacctggcgggcacggtgacgtcgaaggactttggggtgccgacc
aagtcccgcgcggcggcggcggcggcgccgtacaggacgtccggatctttgacggcgctg
agcggcgggcagcacatgtcgtacatcgagcagaacaagagcgcgaacaagaagctggcg
agggaggcggcgccgcggagcaaactgtttgcgaaacgggagaaggaccgggcggcggcg
cggaaggctgctcggggatga

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