Punctularia strigosozonata: PUNSTDRAFT_109122
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Entry
PUNSTDRAFT_109122 CDS
T03131
Name
(RefSeq) DNA helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
psq
Punctularia strigosozonata
Pathway
psq03022
Basal transcription factors
psq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PUNSTDRAFT_109122
09124 Replication and repair
03420 Nucleotide excision repair
PUNSTDRAFT_109122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psq03021
]
PUNSTDRAFT_109122
03400 DNA repair and recombination proteins [BR:
psq03400
]
PUNSTDRAFT_109122
Enzymes [BR:
psq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PUNSTDRAFT_109122
Transcription machinery [BR:
psq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PUNSTDRAFT_109122
DNA repair and recombination proteins [BR:
psq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PUNSTDRAFT_109122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
18876212
NCBI-ProteinID:
XP_007388989
JGI:
109122
UniProt:
R7S1H9
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MASKRGSEAPSDDSMRLKRPRREEESTSYVDVDDDDDASAPPTSVVPRGATINFSALTRK
LAEQRRAQQSDEHGDGSSLSKHRRQQNKLVSHIFMDQDFSWLHLKPDHAARPLWISPEDG
SIILEAFSPIAEQAQDFLVAISEPVSRPAFLHEYKITSYSLYAAVSVGLQTEDIIEVLNR
YSKVPVPESITTFIRERTLSYGKVKLVLKHNKYYVESSHPDTLQFLLKDKVIREARVISQ
QTDNSIRGNTFTTAKAPTKSNLIIPGSSEALKKKDEISGGSTSGAGDNANATNDAELFTS
VVGVDADEIDDEDDNVHSFEIDDAKIDDVKKRCNELEYPMLEEYDFRNDTINPNLDIDLK
PATVIRPYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCFVLCTSSVSV
MQWKQQFMQWSNITDRQIAVFTADQKEKFAGESGIVISTYSMVANTHNRSHDAKKMMDFL
TSREWGFILLDEVHVVPAAMFRRVVTTIKAHAKLGLTATLVREDDKIADLNYMIGPKLYE
ANWMDLAAKGHIANVQCAEVWCPMTPEFYREYLREQSRKRMLLYCMNPKKFQACQFLIKY
HEDRGDKIIVFSDNVYALEAYAKKLGKLYIHGGTGQVERMRILQYFQHSPAVNTIFLSKV
GDTSIDLPEATCLIQISSHFGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMF
YSTKRQQFLIDQGYSFKVITHLDGLEDQPDLVYKSRDEQIELLSSVLLANESEADLGSDI
RAGEGDLAGTVTSKDFGVPTKSRAAAAAAPYRTSGSLTALSGGQHMSYIEQNKSANKKLA
REAAPRSKLFAKREKDRAAARKAARG
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaagcgcggctcagaggctccctcggacgactcgatgcgtctgaaacgtccc
aggcgagaggaggagagcacgagctacgtcgatgtcgacgacgacgatgacgcatccgca
ccgcccacctccgttgtacctcgtggagctaccatcaacttcagcgccctcactcgcaag
ctggcggagcagcgtcgagcgcagcagtccgacgagcatggagatggctcgtcgcttagc
aaacaccgcaggcaacagaacaagttggtttctcacatattcatggaccaagacttttcg
tggttgcacctcaaaccggatcacgctgcgcgcccgctgtggataagcccggaagacggg
agcatcatcctcgaggccttttccccgatcgcagagcaggcgcaggacttcctcgtagct
atcagcgagcctgtgagcagaccggcctttttgcacgaatacaaaatcacgtcctactct
ctatacgccgcagtctcggtcggccttcagacggaggatatcatcgaagtattgaaccga
tactccaaggtccctgtccccgaatcaatcaccacttttatccgcgaaaggacgctttcc
tatggaaaggtcaagctcgtgttgaagcacaacaaatactacgtcgaatccagccatccg
gacacgctccagttcctactcaaggataaagtcatccgagaagcacgcgttatttctcag
cagacggacaacagcatcagagggaacacgttcaccaccgccaaggctccgaccaagagc
aaccttatcatcccgggctcgtcggaggccctcaagaagaaggatgagattagtggcggc
tccacatccggcgccggcgacaacgcgaatgccacgaatgacgccgaactgttcacttcg
gtagtcggcgttgacgcagacgagatcgatgacgaggacgacaacgtccattcattcgag
attgatgatgcgaagatcgacgatgtgaagaagcgatgcaacgagctcgaatacccgatg
ctggaggagtacgacttccggaacgacacgatcaaccccaatctggacatcgatctgaaa
cccgcaaccgtcatcaggccctaccaggagacgagcttatcgaagatgttcgggaacggt
cgcgcgagatccgggattatagtgcttccctgtggcgctggcaagaccctcgtgggcatc
actgcggcctgtacgatcaagaaatcgtgtttcgtactctgcacatcctcagtatcggtg
atgcagtggaagcagcagttcatgcagtggtccaacatcaccgatcgacagattgccgtc
ttcaccgctgatcagaaggagaagttcgcgggcgagagcgggattgtcatttcgacgtat
tcaatggtggcgaatacgcacaataggtcccacgacgctaagaagatgatggacttcctg
acttctcgtgaatggggtttcattctcctggacgaggtgcacgtcgttcccgcggccatg
ttccgtagggtggtcactaccataaaagcccacgcgaagctgggcttgacggcgacgctt
gttcgggaagatgacaagatcgctgacctgaactatatgattgggcccaagctctacgaa
gccaactggatggatcttgcggcgaagggccatattgcaaatgtccagtgcgcggaagtg
tggtgtcctatgacgccagagttctatcgggagtacttgcgcgagcagtcgcggaagcgc
atgcttctctactgcatgaacccgaagaagtttcaggcgtgccagttcctgatcaagtac
cacgaggaccgaggcgacaagattatcgtgttctcagacaatgtgtacgcgctcgaggca
tatgcaaagaagctcgggaagctctatatccacggtggaacgggccaggtcgagcgcatg
agaatcttgcagtacttccaacatagcccggcggtcaacacgatattcttgtccaaggtc
ggggatacttcgatcgacctgcccgaggccacatgcctcatccaaatctcttcgcacttt
gggtcgcgtcgacaggaggcgcaacggctgggccgcattctccgcgcaaaacgtcgaaac
gacgaaggcttcaacgcgtttttctactcgctcgtgtcaaaggacacgcaggagatgttc
tacagcacgaagcggcagcagttcttgatcgatcaagggtactcgttcaaggtcatcacc
catctcgacgggctcgaggaccagcccgacctcgtgtacaagtcgcgggacgagcagatc
gagctcctgtcgtccgtcctgctggcgaacgagagcgaggccgatctcgggtcggatatc
cgggcgggagaaggcgacctggcgggcacggtgacgtcgaaggactttggggtgccgacc
aagtcccgcgcggcggcggcggcggcgccgtacaggacgtccggatctttgacggcgctg
agcggcgggcagcacatgtcgtacatcgagcagaacaagagcgcgaacaagaagctggcg
agggaggcggcgccgcggagcaaactgtttgcgaaacgggagaaggaccgggcggcggcg
cggaaggctgctcggggatga
DBGET
integrated database retrieval system