Pelodiscus sinensis (Chinese soft-shelled turtle): 102448321
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Entry
102448321 CDS
T02980
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pss03009
]
102448321 (DDX55)
Enzymes [BR:
pss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102448321 (DDX55)
Ribosome biogenesis [BR:
pss03009
]
Eukaryotic type
Pre-60S particles
Helicases
102448321 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SHOCT
AAA_22
PaRep2a
Motif
Other DBs
NCBI-GeneID:
102448321
NCBI-ProteinID:
XP_006119737
Ensembl:
ENSPSIG00000012901
UniProt:
K7G2Q4
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MSNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKMQVGAIVITPTRELAVQINEVLS
YFTKQFPQFSQILLIGGRNPIEDIEKFKEQGGNIIIATPGRLEDMFRRKADGLDLASCVK
SLDVLVLDEADRLLDMGFEASLNTILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRI
SVKEKGVAASSTQKTPTRLENYYMICKSDEKFNQLVHFLRQHKQEKHLIFFSTCACVEYY
GKALECLVKNVKIMCIHGKMKHKRNKIFTEFRQLPSGILVCTDVMARGIDIPEVNWVLQY
DPPSSASAFVHRCGRTARIGHLGSALVFLLPMEESYVNFLSINQKCPMQEMKPLKNVVDV
LPKLKSMALSDRAMFEKGMKAFVSCVQAYAKHECNLIFRIKDLDFASLARGFALLRMPKM
PELKGKCFPDFAPISIDTDSIPFKDKNREKQRQKLLEQKRKERLENEGKRKFIRNKAWSK
QKAKKEKKKQITMKRRREEGSNIEDEEMEELLNDTRLLKRLKKGKISEEEFEKKLMSSEK
KIKAVSNSESED
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataaagatgttgctgcagaagcagtaacaggcagtggcaaaacattagctttt
gtaattcccatactagaaattcttctcaggcgggaagaaaagttaaagaaaatgcaggtt
ggagccatagtcatcacacccacgagagagttagctgttcaaatcaatgaagtgctatca
tattttacaaaacagtttccccagtttagccagattcttttgattggtggtaggaatcca
atagaagatattgaaaagttcaaagaacagggagggaacatcattatagccacaccaggc
cgtttggaggatatgttccgaagaaaagcagatgggctggatttagcaagttgtgtgaaa
tcacttgatgtgctggtattggatgaagcagacagacttctagatatgggattcgaagca
agtttaaataccattctggactttttgcccaagcagagacgaacaggcctgttttcagca
actcagactcaagaagtagagaacctggtgagagcaggtctccgtaatcctgttcgcatt
tcagtgaaagagaagggagtagcagcaagtagtactcagaaaacacctacgcggcttgaa
aattactacatgatatgcaaatcagatgaaaaatttaatcagttggtgcattttcttcga
caacacaagcaggagaaacatctgatctttttcagtacctgtgcctgtgtggaatattat
gggaaagcattggaatgtttagttaaaaatgtgaaaataatgtgcattcatgggaaaatg
aaacacaaacgtaacaagatttttaccgagtttcggcaactcccaagtggtattttagtt
tgcacagatgtgatggcccgtggcatagacattccagaagtaaactgggttttacagtat
gatccacctagcagtgcaagtgcctttgtacatcgctgtggtcgaacagctcgaattggc
catttaggtagtgcccttgtatttttgcttcctatggaagaatcatatgttaattttctc
tcaataaaccaaaagtgtcccatgcaggaaatgaaaccactgaaaaatgtggtagatgtt
cttcctaaactgaagtctatggctctgtctgacagagccatgtttgagaaagggatgaaa
gcatttgtatcttgtgtgcaggcttatgccaaacatgagtgcaatcttatcttccgaata
aaagatctggattttgctagtcttgctcgaggttttgcactgctgaggatgccaaagatg
cctgaactaaaaggaaagtgttttccagactttgctcctatcagtattgacacagactct
attccttttaaagataaaaatagagaaaaacaaaggcaaaaactgttagagcaaaaaaga
aaggaaagacttgaaaatgaagggaaaagaaaatttataaggaataaagcctggtcaaag
cagaaagccaaaaaagagaagaagaagcaaattactatgaaaaggagaagagaggagggc
tctaatattgaagatgaggaaatggaggagctgctgaatgacactcgacttttgaaaagg
ttaaaaaagggtaaaattagcgaggaagaatttgagaagaaactgatgagcagtgagaaa
aaaatcaaggctgtgtctaactcagagtcagaagattga
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