Pelodiscus sinensis (Chinese soft-shelled turtle): 102462721
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Entry
102462721 CDS
T02980
Symbol
TRPM1
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pss04040
]
102462721 (TRPM1)
Ion channels [BR:
pss04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102462721 (TRPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM_tetra
Ion_trans
LSDAT_prok
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
102462721
NCBI-ProteinID:
XP_014435955
Ensembl:
ENSPSIG00000015045
LinkDB
All DBs
Position
Unknown
AA seq
1679 aa
AA seq
DB search
MEGKGQGTKKGKGGKFTGSLRRMSGSFKRTSLKGSASGSQKGQKAWIEKTFSKRECIYII
ANNKDVNRCCCGQLISQHIPIPASTATNKNGEETKQLEPQPEKWSVSKHTQTCPTDAYGN
LEFQGGGHSNKAMYIRVSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQNFELQPKLKQ
VFGKGLIKAAMTTGAWIFTGGVSTGVIRHVGDALKDHSSKSRGRICAIGIAPWGIVENKE
DLTGKDVSRVYQTMSNPLSKLCVLNSSHTHFILADNGTLGKYGAEVKLRRQLEKHISLQK
INTRLGQGVPVVGLIVEGGPNVISIVLECLREEPPLPIVICDGSGRASDILSFAHKYSEE
GGIISESLRDQLLVTIQKTFNYNRNQAHQLFVILMECMKKKELITVFRMGSEGQQDIEMS
ILTALLKGTNASAPDQLSLALAWNRVDIARSQIFVFGHHWPPLGSLTATDGTAAEKEKKS
PSAQTKAARGKGKGKKKGGKAKEEPEEETDPRKIELLNWVNSLEQAMLDALVLDRVDFVK
LLIENGVNMQRFLTIPRLEELYNTRLGPPNTLHLLVRDVKKVSLSXKYTFSLIDIGLVLE
YLMGGAYRCNYTRKSFRTLYNNLFGPKRPKALKLLGMEDDEPPTKGKKKKKKKKEEEIDI
DVDDPEVSRFQYPFHELMVWAVLMKRQKMALFLWQRGEETMAKALVACKLYKSMAHESSE
SELVDDISQDLDNNSKDFGQLAVELLDQSYKHDEQVAMKLLTYELKNWSNSTCLKLAVAA
KHRDFIAHTCSQMLLTDMWMGRLRMRKNPGLKVIMGILLPPTILFLEFRTSDDFSYQTSR
ENEDGKEKEEENVDANADTGSRKGDEENGNKKQRSLPIGKKIYEFYNAPIVKFWFYTISY
LAYLMLFNYIILVRMDRWPSLQEWIVISYIVTLALEKVREILMSEPGKLSQKVKVWLQEY
WNITDMVAILVFIIGAILRLQNQPYMGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMM
IGKMMVDMLYFVVIMLVVLMSFGVARQAILHPDEEPSWRLARNIFYMPYWMIYGEVFADQ
IDLYAMEINPPCGDNLYDEDGKRLPPCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNT
FFEVKSISNQVWKFQRYQLIMTFHDRPVLPPPMIIFSHLYIIIIRLCCRCKKKQEGDQDE
RDRGLKLFLNDEELKKLYEFEEQCVEEYFQEKEDEQQSSNDERIRVTSERVENMAMRLEE
VNEREHFMKASLQTVDLRLSQLEELSGRMVNALEKLAGIDKSELTHTRSRASSECDAAYL
LRQSSVNSSDGYSMYRYHVSGDELTFDDSTTPMSPALGLRKKAYYFGTKEEKDYADSKMQ
LVPERQGSLRYTHSANTVASTDYNKTTLEIAQNVSRPPSDSDVCVSGDNKQGISKSNEIT
PQSITQTDIFMNGQSVTRSDFQNTHLTVERTKLEATISYPLEKSKAMRYYPAEAFNACQT
TMLKSRSFIFTHGGKLVEGVNNWTTAYNTIMDKVHPSTIEQWTSEWKYQVEQKLCDEPSP
DYPGVSEAEKQAEQKQLLTDTEEDSDVGEAGVSASHTSIPVTDRTEKENLLSVNPDRTCG
FPSVRSKSLHSHSRKAKSIKDKLNRPGHASSVTNLVVACGSATEEKKTKQENTSTETEC
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggagggtaaagggcagggaactaaaaaaggaaaaggagggaagttcacaggttcctta
aggaggatgagcggctccttcaaacgcacttcactaaagggctcggcatcaggatctcaa
aagggtcaaaaggcttggattgagaagaccttttcaaaaagagaatgcatctacataatt
gccaacaacaaagatgttaacaggtgctgctgtggccagcttattagtcaacacattcca
attcctgcaagtacagcgactaacaaaaatggagaggaaacaaagcaattggaacctcag
ccagaaaaatggtctgtcagtaagcacacccaaacatgtccaacagatgcctatggaaat
cttgagttccagggaggtggacattcaaataaggccatgtatatccgtgtgtcgtatgac
acgaaaccagattctcttcttcatctcatggtgaaagattggcaactggaacttcccaag
cttttaatctctgttcatgggggcctccagaattttgaattgcaacctaaattgaaacaa
gtatttgggaaaggcctgatcaaggctgccatgacaacaggagcctggattttcactgga
ggagttagcactggagtaattcgccatgtgggagatgccttgaaagatcattcatccaag
tccagaggacgaatctgtgccataggaattgcaccatggggcattgtggaaaataaagag
gatctgactgggaaagatgtatcaagagtttatcaaacaatgtcaaatcctctaagcaag
ctctgtgttctcaacagttctcatacacacttcattctagcggacaacggcacacttggt
aaatatggagctgaagttaaattgcgacgtcagctggaaaaacacatctcccttcagaaa
attaacacacggctgggacaaggtgtgcctgtggttgggttgatagtggaaggaggtccc
aatgtgatctctatcgtcctggaatgtctgcgagaagagccccctctgcccattgtgatc
tgtgatggcagtggccgagcatctgacattctgtcttttgcacacaaatattctgaggaa
ggggggataataagtgaatctctaagggaccagcttctagttaccattcaaaaaactttc
aactacaaccggaaccaagcccaccagctgtttgtcattctcatggagtgtatgaaaaag
aaggaacttataactgtgttccgtatgggttctgaggggcaacaggacattgaaatgtct
attttaactgctctacttaaaggtaccaacgcatctgcaccagatcagctgagcttggca
ttggcctggaaccgtgtggacattgcacgaagccaaatctttgtctttgggcatcactgg
ccgcctttaggaagccttacagcaactgatggcacagcagctgaaaaggaaaagaaatcc
ccatcagctcaaactaaagcagccagagggaaaggaaaagggaaaaaaaagggagggaaa
gcgaaagaagagccagaagaagaaacagatccacggaagatagaactactaaactgggtg
aattccctggagcaggcgatgctggatgccctggtactggatcgagttgattttgtaaaa
ctcctgattgaaaatggtgtgaacatgcaacgcttcctcactattcctcgactagaagag
ctgtataatactagattgggtccaccaaatacactacatttgctagtcagggatgtgaaa
aaggtaagcttatcctaaaaatatactttcagtctgatagatattggtcttgtccttgaa
tacctcatgggtggagcttatcgctgcaactatactcgaaaaagttttcggaccctttac
aataatttatttggaccaaagaggccaaaagctcttaaacttttaggaatggaggatgac
gagcctccaaccaaagggaagaaaaagaagaaaaagaaaaaggaggaagagatagatatt
gatgtggatgacccagaagtcagccgctttcagtatccatttcatgaactcatggtatgg
gcagtgctgatgaaacggcagaagatggctctctttctttggcagcgaggggaggagacc
atggccaaggcacttgtggcatgtaaactgtacaaatccatggcccatgagtcttcagag
agtgaactggtggatgacatctctcaggatttggacaacaactcaaaagactttggccag
ctggctgttgaattgttagatcaatcttataaacatgatgaacaggtggctatgaaatta
ctgacctatgaattgaaaaattggagtaattccacctgtctaaaactcgctgtggcagct
aaacacagagacttcatagctcacacttgcagccagatgttattaacagacatgtggatg
gggcggctacgtatgcgtaaaaatccaggtcttaaggttataatggggattctcttacca
cccaccatcctgttcctagagtttcgcacatctgatgatttttcctatcagacatcaaga
gaaaatgaagatggcaaagaaaaagaagaggaaaatgtggatgcaaatgctgatacaggc
tcccgaaaaggagatgaagagaatggaaacaaaaagcaacggagccttccaattggaaaa
aagatttatgaattttataatgcacctattgtaaagttctggttttatacgatctcatac
ttggcttacttaatgttattcaattatataatcttggtacggatggaccgctggccctcc
ctccaggaatggattgtcatctcctatattgtgactctggcattagagaaagtaagagag
attctgatgtcagagcctggcaagctgagccagaaagtgaaagtctggctgcaggaatac
tggaatatcaccgatatggtggctattttagtatttataattggagcaattcttcgtcta
cagaaccagccttacatgggctatggaagagtaatctactgtgtggatatcattttctgg
tacattagagtactggatatctttggtgtgaacaaatatttgggaccctatgtcatgatg
attgggaaaatgatggttgacatgctgtattttgtggtcatcatgcttgtggttctgatg
agttttggagtagcccgccaagctatcctgcacccagatgaggaaccgtcttggagacta
gcccgcaacatcttctatatgccctactggatgatctatggagaggtgtttgcagaccag
atagacctctatgccatggaaattaatcctccttgtggggataatctttatgatgaggat
ggtaaacgtctccctccatgcatacctggggcctggctcactcctgctatcatggcttgt
taccttttggtagcaaacattctactggtaaaccttctgattgctgtcttcaacaatacc
ttctttgaagtgaagtccatatctaaccaagtttggaaattccaacgatatcagctgatc
atgacattccatgatagacctgtcctgcctccacctatgatcatcttcagtcatctctac
ataatcatcatccgcctttgttgtcgctgtaagaagaaacaagaaggggaccaggatgag
cgtgaccggggactaaaattatttctgaatgatgaagagctgaagaaattgtatgaattt
gaagagcaatgtgttgaggaatattttcaggaaaaagaagatgaacaacaatcatctaat
gatgaacgaatcagagtcacatctgaaagagtggaaaacatggctatgaggttggaagaa
gtgaatgaaagagaacattttatgaaagcttctcttcagaccgttgaccttcgactttct
caactggaagagctatctggtcggatggtgaatgcccttgaaaagctggcgggtattgac
aaatccgagctgacgcatacacgctcacgagcttcttctgaatgtgatgcagcttacctc
ctaaggcaaagcagtgtcaacagttctgatggctacagcatgtacagatatcatgtcagt
ggtgacgagttaacctttgatgatagcaccaccccaatgtcaccagccttgggattgcgc
aaaaaagcctattattttggtacaaaggaagagaaagattatgcagactcaaagatgcaa
ctagttccagaacgtcagggtagtctgcgctatacccacagtgcaaacacagttgcctct
acagattacaataaaactactttagaaattgcacagaatgtcagtagacccccatctgat
tcagatgtttgtgtttcaggagataacaagcaaggtatttccaagagtaatgaaataact
ccccagagcataacccaaacagatatttttatgaatggacagtccgtcacaagatcagat
tttcagaacactcatttaacagtagaacggaccaagttagaagctactatctcttacccc
ttagaaaaatctaaggcaatgcgctattaccctgctgaagctttcaatgcttgtcaaaca
accatgctaaagtcaaggagctttatatttacacatggtgggaagctggttgaaggggtc
aacaactggactacagcatataacaccataatggataaagtgcatccttccacaattgaa
cagtggaccagtgagtggaaataccaggttgaacagaaactttgtgatgaacctagtcca
gactatcctggtgtttctgaagcagaaaagcaagcagaacaaaaacaattactgacagat
acagaagaggacagcgatgttggtgaagcaggtgtcagtgcctcccatacttctatacct
gttaccgacagaactgaaaaagaaaacttactgtcagtgaatccagacaggacgtgtgga
ttcccatctgtacgctcaaagagtttacacagccattctcggaaagccaagtccattaag
gacaaattaaatagaccaggacatgccagcagtgtaactaatctagtggtggcctgtggc
agtgcaacagaagaaaaaaaaactaagcaagaaaacacttccacagaaactgaatgctaa
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integrated database retrieval system
