Pelodiscus sinensis (Chinese soft-shelled turtle): 102463581
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Entry
102463581 CDS
T02980
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin Fat 4-like
KO
K16669
protocadherin Fat 4
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pss04515
]
102463581
Cell adhesion molecules [BR:
pss04515
]
Cadherins
Cadherin related
102463581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
EGF
Cadherin_3
Cadherin_2
EGF_CA
hEGF
EGF_2
EGF_3
SCIMP
Motif
Other DBs
NCBI-GeneID:
102463581
NCBI-ProteinID:
XP_014433385
LinkDB
All DBs
Position
Unknown
AA seq
3268 aa
AA seq
DB search
MNFIYVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTII
SGADDSFHIDPESGDLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDVNDHIPK
FSKPVYSFDVPEDTTPGSLVAAILATDDDSGINGEITYTVSEDDEDGMFFLNPVTGVFNL
TRILDYEVQQYYILTVRAEDGGGQFTTVRVYVNILDVNDNPPLFSMPSYSTSLMENLPPG
STILNFNVTDADYGANSQLSYSITSGDSLGQFNIDKNGVLSIKQPLDRESQSFYSLVVQV
HDMATLPAFRYTSTTQVSIILLDVNDNPPSFISPKLTYIPENTPIDTIVFKAQATDPDSG
PNSYIEYTLLRPLGNKFSIGTIDGEVRLTGELDRETVANYTLTVVATDKGQPSLSSSTDV
IVVVLDINDNSPLFAQKLYKVEVGENTLTGTDLIQVFATDGDEGTNGQVRYSIIGGNSNN
EFRIDSVTGVVTVAKPLDREKKPSYSLTVQSSDRGSSSRTDTTTVNIVLMDVNDFIPIFE
LSPYSVNVPENLGTLPKVILQVVARDDDQGLNGKLTYLLVGGNEDSAFTLSASGELHLVQ
SLDRETKEQYILLITAADSGLPALTGTGTIAVIVDDVNDNVPTFAFKMYSTTIPEDAPTG
TDILLVNSSDTDASVNAVISYSLIGGNSQFTINPSTGQIITSALLDRETKENYTLVVVAS
DGGFPKALSSSTSVLVTVIDVNDNPPKFQHHPYVTHIPSPTTSGSFVFAVTVTDADSGSN
AELHYSLMGKNSEKFHIDPMRGAIMAADPLTGASEVTFSVHVKDGGLYPKTDSTTVTVRF
ANKADFPQVQAEQRTFIFPENQAIGTLVTTVSGSSSRGGSLSYYIASGNLGNTFQIDQLT
GQFSMSQPLDFEVIQKYVVWIEARDMGFPPFSSYEKLEVTVVDVNDNAPEFERDPFIAEI
MENLSPRKILTLTAVDKDSGSNGQLNYEIVDGNKENSFSISRSTGEIRSVRPLDREKLAR
YTLTIKASDRGTPLQSTTVKVIVNILDENDNAPRFSQIFSAPVPENAPLGYTVTRVTTSD
EDIGLNAISRYFIRDTSLPFIINPSTGDITISRHLNREDTDRYRIRVSARDSGWTVSTDV
TIFVTDINDNAPRFTKTSYYLDCPELAEVGLKVTQVSAIDPDEGSNGQVFYFIKSQSEYF
RINATTGEIFNKQYLRYQNSSGSSNMNINRHSFIVTSSDRGSPSLLSETTVTINIVDSND
NAPQFLASKYFTPVTKNVGVGTKLIKVTAVDDKDFGLNSEVEYFISNENNADKFKLERTT
GWISVASSLMTDLNQNFLLTVKAKDKGNPPLSSEVIVQIVVTEENYHTPEFSQSHISVTI
PESHVVGAVVRTVSARDRDAAMNGLITYNIFSGNEAGVFAINTSTGALTLAKLLDYEVCQ
NHEMIVSATDGGWVARTGYCSVTVNVIDVNDNSPVFSPEDYFPNVLENAPSGTTVIRLNA
TDADSGPNAVIAYAVQSSDSDLFVIDPNTGIITTQGFLDYETKQSYHLTVKAFNVPDEER
CSFASVNIQLEGTNEYVPRFVSKLYYFEVSEAASKGMVVGEVFASDRDMGTDGEVQYLIY
GSSRKKGFQINEKSGQIYVSGPLDREKXERISLKVLAKNSGSIRGADVDEVIVNITVLDA
NDPPVFSLKVYNVQISEGVPPGTHVTFVSAFDSDSVPSWSRFSYFIGYGNDNGAFSINPQ
TGQVTVTADLDRETLPLYNLTVLAIDSGTPSATGSTSLFVTLEDINDNGPTLSTSQGEVM
ENTRAGTHVMTLQSSDPDLPPNQGPFTYYLLSTGPATSYFSLSTAGILTTTREIDREQIS
DFYLSVITRDSGIPQMSSTGTVQIKVIDQNDNPSQPRTVEIFVHYYGNLFPGGILGSVKP
QDPDVLDSFHCSLTSGVTSLFNIPGGSCDLNSQARSTDGTFDLTILSNDGLHNAVTSNVR
VFFSGFSNATIDNSILLRLGVQTVRDFLTNHYLHFLRIASSQLPGLGTAVQLYGVYEESN
RTYLMAAVKRNNNQYVNPSGVATFFESIKEILFRQSGVRIESVDHDSCVQSPCQNGGSCL
RRLAVKPILKSHESIPVIIMANEPLQPFVCRCMPGYDGNLCETDMDECLPSPCHNDGTCH
NLVGGFSCNCPDGFTGMACERDINECLSSPCKNAATCQNFPGSFNCVCKTGYTGKTCDSA
VNYCECNPCFNGGSCQSGMEGYYCHCPFGVFGNHCELNSYGFEELSYMEFPSMDPNNNYI
YIKFATIKSNALLLYNYDNQTGERAEFLALEITEERLRFSYNLGSGTYKLTTTKEVSDGQ
FHTVIARRAGMAASLTVDSCSEDQEPGYCTVSNMAVSADWTLDVQPNRVTVGGIRSLEPI
LQRRGQVESHDFVGCIMEFAVNGRPLEPSQALAAQGILDRCPRLEGACAISPCQHGGTCV
DYWSWQQCHCKDGFTGKHCEKYITADTALSFEGKGRLDYHMSRNKKREYMMKYGTRGAIW
EPLNVNHLEVKFRTRSENGILIHIQENSNYTTVKIKNGKMHYTSDAGVGGKVERNIPEVY
TADGQWHSFLIEKNGSTTALSIDKIYRREILHITQDFGGLNVLTVSLGGIPPSHTPRSTE
TGFDGCIAYVKYCGESLPFSGKHSTATISKTDSSVKIGCRGPNICASNPCWGELMCINQW
YAYKCVPPGACVSNPCQNGGSCEPGAHSGFTCSCPELYTGRTCEMVVACLGILCPQGHVC
KGGLNGGHVCVPHPHPAELSLPLWAVPAIVGSCATVLALLVLSLILCNQCRGKKTKVPKE
EKKTKEKKKKGSENVAFDDPDNIPPYGDDMTVRKQPEGNPKPDIIERENPYLIYDETDIP
HNTETIPSAPLASPEPEIEHYDIENASSIAPSDADIIQHYKQFRSHTPKFSIQRHSPLGF
ARQSPMPLGASSLTYQPSYGQGLRTTSLSHSACPTPNPLSRHSPAPFSKSSAFYRNSPAR
ELHLSIREGSPLEMHNDVCQPGIFNYATRLGRRSKSPQTIATHGSRPGSRLKQPIGQIPL
ETAPPVGLSIEEVERLNTPRPRNPSICSADHGRSSSEEDCRRPLSRTRNPADGIPAPESS
SDSDSHESFTCSEMEYDRDKPMVYTSRMPKLSQVNESDADDEDNYGARLKPRRYPGRRAE
GGPVGAQATASNIAENTLPIKLGQQTGNFNWDNLLNWGPGFGHYVDVFKDLASLPEKAAA
AAAANTNEESKGGTTKPISKDGEAEQYV
NT seq
9807 nt
NT seq
+upstream
nt +downstream
nt
atgaactttatttatgtggaaataacacttcaagatatcaatgacaacccaccagtattc
ccaacagacatgcttgatctaacagtagaagagaatataggggatggatctaaaataatg
cagctgacagccatggatgctgatgagggagctaatgctcttgtcacttacactatcatc
agtggtgctgatgacagcttccacattgaccctgaatcaggagatctgatagccaccaaa
cgtttggatagggaacgtcgctccaagtattccctgctggttcgtgctgatgatggtctg
cagtcctcagacatgagaataaacattactgttagtgatgttaatgatcacatacccaaa
ttctccaaaccagtgtattcatttgatgtaccagaagatactactccaggttctttggta
gcagccattttagctactgatgatgactctggcatcaatggagaaatcacatacactgta
agtgaagatgatgaagatggcatgttcttcttgaatccagtcaccggagtctttaacctc
actcgtatcttggactatgaagtgcagcaatattacattcttactgtccgtgcagaagat
ggaggtggtcagttcactaccgtcagagtttacgtcaacatactggatgtaaatgataat
ccgcctctattcagcatgccctcatacagcacgtccttgatggaaaatctgcctcctgga
tctactattctcaactttaatgtgactgatgcagattatggcgctaactcacagttgtca
tacagcattacatcaggagatagcttaggtcaatttaatattgacaagaatggagttctg
agcatcaagcagcctttggatcgggagagtcagtccttctatagccttgttgttcaggtt
catgacatggctactctaccagccttcagatatacaagcacaacgcaagtgtccattatt
ttactggatgtgaatgacaatcctccaagctttatctctccaaagctgacgtacatccca
gaaaacacacccatagacacgattgtgtttaaagctcaagcaactgacccagacagtgga
cctaacagctatattgaatatactctgctgaggcctttgggaaataaatttagtattggc
actattgatggtgaagtaaggctcactggggaacttgacagagaaacagttgctaattat
accttaactgtggtagctacagacaaaggtcaaccatccctttcttcatctacagatgtc
attgtagtagtccttgatatcaatgataacagccccctcttcgcacaaaagctatataaa
gtagaggtaggtgaaaatactctgacaggaacagatctgattcaggtgtttgctacagat
ggagatgaaggcacaaatgggcaggttcgctattctataatcggtgggaacagcaacaat
gagtttcgaatagactctgttactggggtggtaacagtagccaaacctttggatcgagag
aaaaagccctcctactcactaactgttcagtcatctgatcgtggaagtagttccagaaca
gacaccaccacagtcaatattgttctgatggatgtcaatgattttattccgatatttgag
ctttctccatattctgtcaatgtccctgagaatttagggacacttccaaaagttattctt
caggttgtagcaagggatgatgatcaaggtctaaacggcaaacttacataccttcttgtt
ggtggaaatgaagacagtgcctttactctctcagccagtggagagctccacttggtacaa
agcctggatcgagagactaaggagcaatacatcttgctgatcacagctgctgattctgga
ttgcctgcccttactggcactggaactattgctgtcatagtggatgatgtcaatgacaat
gttccgacatttgcctttaagatgtattctaccaccattcctgaggatgcacctacaggg
acggatattttgctagtaaactcttcagatacagatgcttcagttaatgcagttatcagc
tatagtcttattggtggtaattcacaattcacaatcaatccatcaactggacagatcatc
accagtgcattattagatagagagactaaggagaactacaccttagtggttgtggccagc
gatggtggctttcccaaagcgctttccagttccaccagtgtacttgtcactgttattgat
gtgaatgacaatcctcccaaatttcaacaccacccttacgtcacacatattccatcacct
acaacttcaggttcgtttgtgtttgctgtgacagtcacagatgctgattctggatccaat
gctgagcttcattattccctcatgggaaagaactctgaaaaattccacattgacccaatg
cgaggggcaattatggctgctgacccactgacaggggcttctgaagtgactttttccgtt
catgtaaaagatggtggcttgtatccaaaaacagactctacaactgtaactgtaagattt
gccaacaaagcagatttccctcaagttcaagctgagcaacggactttcatatttcctgaa
aatcaagcgattggtaccctagtcaccacagtttctggatcttcgtccaggggtgggtcc
ttatcatactacattgctagtggtaaccttggcaataccttccaaattgaccaactaaca
ggacagttctccatgagccaacctttggattttgaagttatacagaaatatgtggtttgg
attgaggccagagatatgggctttcctcctttttcctcttatgagaaattagaagtaaca
gtggtagatgtcaatgataatgcaccagagtttgagcgagatccattcattgctgaaata
atggagaacctttcaccgcgtaaaattctgactctcactgctgtggacaaggacagtggc
tcaaatggacagttgaactatgaaatagttgatggcaataaagaaaatagtttcagtatt
agtcgatccacaggtgaaattagaagcgtcagacccttggacagagaaaaattggctcgc
tacacactaaccatcaaagcttcagacagaggtacccctcttcagagcaccacagtaaaa
gttattgttaatattttagatgaaaatgataatgctcccaggttttctcagatattcagt
gctccagtgcctgaaaatgcacctttgggttacacagttacacgagtcacaacttcagat
gaagatattggtttgaatgcaatcagcaggtactttataagggatacaagtcttccattt
atcatcaaccccagtaccggggacattacaatcagtcggcacctcaacagggaagataca
gaccgctatagaatcagagtttctgcacgtgattctgggtggactgtaagcacagatgtg
actatatttgtgaccgacatcaatgataatgccccacgattcacaaaaacatcctattac
ttagattgtcccgagcttgctgaagttggattaaaagtcacacaggtttcagcaatagat
cctgatgaaggctctaatggccaagttttctacttcataaaatcccagtctgagtacttc
cgaattaatgctaccactggggagattttcaataagcaatatttaaggtatcaaaactcc
agtggttccagcaacatgaatatcaataggcacagcttcatagttacttcttcagaccga
ggcagtccttctttgctgagtgagacgacagtcacaatcaacatagtggatagcaatgac
aatgcaccacagtttcttgccagtaaatattttacccctgtgactaaaaatgtaggtgtt
ggcactaaattaattaaagttacagcagttgatgataaggactttggattgaattctgaa
gttgaatacttcatttctaatgaaaacaatgctgataaattcaagctggagagaactaca
ggctggatttctgtagcgtcttcactcatgactgatttgaaccaaaactttctgcttaca
gtaaaagcaaaggataaaggtaaccccccactctcatcggaggttattgttcaaatagtt
gtcacagaggaaaactaccatacacctgagttctcacaaagccatataagtgttactatc
cctgagagtcatgtggttggagcagttgttagaactgtttcagctcgggacagagatgct
gctatgaatggactaatcacatataatattttttcaggaaatgaggctggtgtctttgct
attaatacatctacaggagcattaactctagccaaactccttgattatgaggtatgccaa
aatcatgagatgattgttagtgctacagatggaggatgggtagctagaacaggttactgc
agtgtcacagttaatgttattgatgtgaatgataattctccagtattcagcccagaagac
tattttcctaatgtattagaaaatgccccgagtgggacaactgttatccgtctaaatgca
actgatgccgattctggacctaatgctgtgattgcatatgcagttcagtcctcagatagt
gacctttttgtcattgatcccaacacaggaattatcaccacccaagggtttttagactat
gaaacaaaacaaagttatcatctaactgtgaaagcttttaatgttccagatgaagagcga
tgcagttttgctagtgtcaacatccagttagaaggaacaaatgagtatgtgccacgtttt
gtgtctaagctttactattttgaggtctctgaagcagcgtctaaaggaatggttgttgga
gaagtctttgcaagtgaccgtgatatgggaactgatggagaagtgcaatatcttatctat
ggcagtagcagaaagaaaggtttccagattaatgagaagagtggacagatttatgtttca
ggtcctcttgacagagaaaagtaagagcgtatctctttgaaagttcttgcaaaaaattct
gggagcattcgtggtgcagatgtagatgaagtaatagtaaatataactgtcttagatgct
aatgatcctcctgtttttagcctcaaggtttacaatgtacagatcagtgaaggtgttcct
ccagggactcatgtcacatttgtaagtgcctttgattcagattccgtcccaagctggagc
agattctcctattttattggttatgggaatgacaatggtgccttttccatcaatccacaa
acaggacaggtgactgtcactgcagacttggacagagaaactttacctctctacaacctg
actgtgttagcaattgattcaggaacaccttcagccacaggaagtacctctttattcgta
actttggaagatatcaatgataatggacctaccctgtctaccagtcagggagaagtaatg
gaaaatactcgtgcaggaactcatgtgatgacacttcagtcatcagatcctgatctccct
ccaaatcaagggccctttacctactacttgcttagcactggtcctgcaacaagttatttt
agtcttagcactgcaggaattttgaccacaactagggaaatagacagagagcagataagc
gacttctacctgtcagttattaccagagactctggcatccctcagatgtcttctacagga
actgtacaaatcaaagtaatagaccaaaatgacaatccttcacaacctagaacagtagag
atctttgttcattattatggcaacctattcccaggtggaattttaggtagtgtgaaaccc
caggatccagatgttttagacagcttccactgttccctcacttcaggagttacaagcctc
tttaatattccagggggttcctgtgatctgaattctcaggcaaggtccacagatggaaca
tttgatctgacaatcctgagcaacgatgggttacacaatgcagttactagcaatgttcgg
gttttcttttcaggattcagtaatgctacaattgacaacagcatccttcttcgccttggt
gtgcaaactgtgcgagattttttgaccaaccactaccttcatttcctgcgtattgccagt
tcacagttgcctggattagggacagctgtgcagctctatggggtttatgaagagagtaac
agaacctacctgatggcagctgtgaaacggaacaacaatcagtatgtgaatcccagtggt
gtggctaccttctttgagagcattaaagaaatccttttccgtcagagtggagtaaggata
gagtctgtagatcatgattcatgtgtacaaagcccatgtcaaaatggaggaagctgtctg
agaaggctggctgtgaaacctattttaaagagccatgagagcatcccagtcatcatcatg
gcaaatgaacctctgcagccttttgtgtgtaggtgcatgccaggatatgatggtaatttg
tgtgaaactgacatggacgaatgtctcccatccccttgccacaatgatgggacttgccac
aacttggtgggaggcttctcatgcaattgtccagatggttttactggaatggcctgtgag
agagacatcaatgagtgcctgtccagcccctgtaaaaatgctgccacctgccagaacttc
cccggaagcttcaactgtgtttgtaaaaccggatatacagggaaaacatgtgactctgct
gtcaattactgtgaatgcaacccctgtttcaatggaggatcatgtcaaagtggaatggaa
ggatattactgccactgtccatttggtgtctttggaaatcattgtgaattgaatagttat
ggatttgaagagttgtcctatatggagtttcccagtatggatccgaacaacaattatatt
tatataaagtttgcaaccatcaaaagtaatgctttactgctgtataactatgacaaccag
actggagaacgggcagaattcctggctctggaaataacagaagaaagactgagattctcc
tacaatcttggcagtggcacatataaacttaccacaacgaaggaagtgtctgatggccag
tttcacactgttattgcccggagggctggaatggcagcatccttgacagtggactcctgt
tccgaggatcaggaaccaggctattgtactgttagtaatatggctgtttccgcggactgg
actcttgatgtacaaccaaatcgagtaactgttggtggcatcagatctctagagccaata
cttcaaaggagaggacaagtggaaagtcatgattttgtgggttgtataatggagtttgca
gtcaatggccgtcctctggaacctagccaggctttggcggctcaaggaatcttagatcga
tgccctagattagaaggagcttgtgccataagcccttgccaacacggtggcacctgtgtt
gattattggtcatggcaacaatgtcattgcaaagatggattcactgggaaacactgtgaa
aaatatattactgccgatactgccttatcatttgaaggcaaaggacgccttgactaccac
atgagccgaaataagaaacgagagtacatgatgaaatatggcactagaggtgctatttgg
gagcctctgaacgtaaaccatttggaagtgaaattcaggacaaggagtgagaatggaatt
ttaattcatatccaggaaaacagcaattacactactgtgaagataaaaaatggcaaaatg
cattacacgtctgatgctggagttggtgggaaagtggagaggaatattcctgaagtttac
actgcagatggtcaatggcattccttccttattgaaaagaatggatccaccactgctctg
tccattgacaaaatctacagaagagagattcttcatatcacccaagactttggagggctt
aatgttcttacagtttctctgggaggaatcccgccaagccacactcccagaagtacagag
acaggttttgatggctgtattgcctatgtgaagtactgtggagaaagtcttcctttcagt
ggaaagcacagcactgctaccatatccaaaacggactcctccgtgaagattggctgccga
ggtcccaacatttgtgccagtaatccatgctggggtgaattaatgtgcatcaaccagtgg
tatgcatataaatgtgtccctccaggagcctgtgtttccaacccttgccagaatggtggc
agctgtgaaccaggtgcgcattctggatttacctgcagctgtcctgaattatacacagga
agaacatgtgagatggtggtggcttgtctgggtatcctgtgtccccaaggacatgtgtgc
aagggtggactcaatggaggacatgtctgtgtccctcacccgcacccagcggagctgtct
ctcccactatgggctgttcctgccattgttggcagttgtgcgacagttcttgccctgctt
gtccttagcctgatcctctgtaatcagtgcaggggaaagaagacaaaagtgccaaaggag
gagaagaaaacaaaggaaaagaagaaaaaagggagtgagaacgttgcatttgatgaccct
gacaacattccgccctatggcgatgacatgacggtcaggaagcagcctgaagggaaccct
aagcctgatataattgaaagagaaaacccttaccttatctatgacgagaccgacatcccc
cataatacagagactatacctagtgcccctctggcttcccctgaacctgaaatagagcac
tatgacattgaaaatgcaagcagcattgctccttcagacgcagacatcattcaacactac
aagcagttccggagtcacacgcccaaattctctatccagcggcatagcccacttggcttt
gcaaggcaatccccaatgccactgggagcaagcagcttgacttatcagccgtcatatggt
cagggactcaggacaacttccttaagccactctgcatgccctactcccaaccctttatct
cgtcatagtcccgctccgttttccaagtcgtcagctttctacagaaacagtcctgcaagg
gaacttcatctgtccataagagaagggagtcctttggagatgcacaatgacgtctgccag
cctggcatttttaactatgccactagattagggagaagaagtaagagtccccagaccata
gcaactcatggttccagaccgggaagtcgcctaaagcaaccaatagggcagattcctttg
gagactgctcctcctgtaggactctctattgaagaagtggagagacttaacactcctcgc
cctagaaatccaagcatctgtagtgctgatcacggaaggtcttcttcagaggaggactgc
agaaggccactgtcaagaacacggaatccagctgatggtattccagctccagaatcatca
tctgatagtgactcccatgagtcgtttacttgctcagaaatggagtatgatagagacaaa
cctatggtgtacacatccagaatgcccaaattatctcaagttaatgagtcagatgcagat
gacgaagacaattatggtgctaggctgaagcctaggaggtaccctggcaggagagctgag
ggtgggcctgtgggtgcacaggcaacagcatctaatattgctgagaacacattgcccata
aagcttggccagcaaactggaaatttcaactgggacaaccttttgaactggggtccaggc
tttggacattatgtggatgtttttaaagatttggcatcactcccagaaaaagcagcagca
gcagcagcagcgaacacaaatgaagaaagcaaaggtggcacaacaaagcccatttccaaa
gatggggaagcagaacaatatgtatag
DBGET
integrated database retrieval system
