Pseudomonas syringae pv. tomato DC3000: PSPTO_0700
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Entry
PSPTO_0700 CDS
T00118
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PSPTO_0700 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pst03400
]
PSPTO_0700 (xseB)
Enzymes [BR:
pst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PSPTO_0700 (xseB)
DNA repair and recombination proteins [BR:
pst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PSPTO_0700 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
FH2
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
AAO54242
UniProt:
Q889P9
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All DBs
Position
complement(753503..753748)
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AA seq
81 aa
AA seq
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MARKKAALDFEQSLADLQALVERLENGELSLEDSLTAFEQGVRLTRDCQSALTQAEQKVQ
VLLERDGELTEEPFDDAELPE
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaagaaagctgcactggatttcgaacagtctctcgctgatctgcaagcgctg
gtagagcgactggagaatggtgagctgtcgctggaagactcgttgaccgccttcgagcaa
ggcgtgcgcctgacgcgtgactgccagagcgccctcacccaggctgaacaaaaggttcaa
gtgttgctggaacgcgacggtgaactgaccgaagagccgttcgacgacgcggaactcccc
gaatga
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