Pantoea stewartii subsp. stewartii: DSJ_21740
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Entry
DSJ_21740 CDS
T04970
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pstw
Pantoea stewartii subsp. stewartii
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstw03019
]
DSJ_21740
03009 Ribosome biogenesis [BR:
pstw03009
]
DSJ_21740
Messenger RNA biogenesis [BR:
pstw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DSJ_21740
Ribosome biogenesis [BR:
pstw03009
]
Prokaryotic type
rRNA processing factors
DSJ_21740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ARF51662
UniProt:
H3RHJ9
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All DBs
Position
complement(4361893..4363362)
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AA seq
489 aa
AA seq
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MTAELLVNVTPAETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI
GLDKAAFLHASDIMPHTECVAGDEKKNFVVRDIAELVRQGQDLVVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIASEKERECLKAVVADYCDDLGGFIIRTAAEGIGEE
ELAQDAAFLKRLWTKVSERKKRNQTRCLLYGELALAQRILRDFAGAALDRIRVDSRLTCD
LLKEFTSEYIPEMSSKLELYNGKQPIFDLFDVENEIQRSLERKVELKSGGYLIIDQTEAM
TTIDINTGAFVGHRNLDETIFNTNVEATQAIARQLRLRNLGGIIIIDFIDMSNEDHRRRV
LHSLETALSKDRVKTGISGFSALGLVEMTRKRTRESIEHVLCEDCPVCKGRGTLKTVETV
CYEIMREIVRVHHAYDSDRFLVYVSPTVGEALKTDESHALAEVELFVGKQVKVHVEALYT
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagaactactggttaacgttacgcctgctgaaacgcgcgtcgcctacattgat
ggcggtatcctgcaggaaattcacattgagcgcgaagcccggcgtggcatcgtcggtaat
atttacaaagggcgcgtcagccgggttttgcctggcatgcaggcggcatttgtggatatc
gggcttgataaagcggccttcctgcatgcgtccgacatcatgccgcatacagaatgcgtt
gcgggcgatgaaaagaaaaatttcgtggtacgtgatatcgcggagctggtgcgtcaggga
caggatctcgtggtgcaggtggtgaaagatccccttggcactaaaggcgcgcggctgacc
acagatatcacgttgccctcgcgctacctggtgtttatgcccggcgcttcacacgttggc
gtttcacaacgcattgccagtgaaaaagagcgtgaatgccttaaagccgtcgtggctgac
tactgtgacgacctgggcggtttcatcatccgcaccgcagcggaaggcattggcgaagaa
gagctggcgcaggatgctgcgtttctgaaacggctctggaccaaagtcagcgagcggaaa
aagcgcaatcaaacccgttgtttactctatggtgagctggcgctggcgcagcgtattctg
cgcgattttgcgggcgctgcgctggatcgcattcgtgtcgattcgcgcctgacctgcgat
ctccttaaggaattcaccagcgaatacatcccggagatgtccagtaagctcgagctttac
aatggcaaacagcccatctttgatctgtttgatgttgagaacgagattcagcgctcactg
gaacgtaaagttgaactgaaatctggcggatacctcatcatcgaccaaactgaagcgatg
acgacaatcgacatcaacaccggtgcctttgtcggacaccgaaaccttgatgaaactatt
tttaacaccaatgtggaagcgacacaggcgatcgcccgccaactgaggctacgtaacctt
ggcggcatcatcattatcgacttcattgatatgagtaatgaagatcatcgccgtcgcgtg
ctgcattcgttggaaaccgctctcagtaaagacagagtgaagacgggcatcagcgggttt
tccgccttagggctggtggaaatgacgcgcaagcgtacgcgcgaaagtatcgaacacgtg
ctgtgtgaggattgcccggtgtgtaaagggcgcggcacactgaagaccgtcgaaacggtg
tgctacgaaattatgcgtgaaattgttcgtgttcatcatgcttatgattctgaccgtttc
ctggtctacgtgtcgccgacggtgggcgaagcgttgaaaacggatgagtcccatgcgctg
gcggaagtggagctgtttgtcggcaagcaggtaaaggtgcatgttgaagcgctctatact
caggaacagttcgatgtggtcatgatgtag
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