Pedobacter steynii: BFS30_03840
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Entry
BFS30_03840 CDS
T04469
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
psty
Pedobacter steynii
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psty03009
]
BFS30_03840
Enzymes [BR:
psty01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
BFS30_03840
Ribosome biogenesis [BR:
psty03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BFS30_03840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AOM76361
UniProt:
A0A1D7QCE6
LinkDB
All DBs
Position
complement(956404..957435)
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AA seq
343 aa
AA seq
DB search
MENSNSVQELEEQDLYEHFNIVVDKGQSLLRIDKFLMGRMENASRNRIQNAIDAGNVLVN
QGTVKASYKVKPADEISIVFPHPPRDTEVYPENIPLDIVYEDDDLLVVNKPAGMVVHPGF
NNYTGTLVNALAYHFEKLPQLPGNEGRPGLVHRIDKDTSGLLLISKNEITMTKLAKQFFD
HTITRKYIAMAWGDILENGTVTGYIGRSAKNRIVMDVYDDEEKGKWSVTHYSVLERLGYV
TLISCQLETGRTHQIRAHMQHIGHPLFNDANYGGDKILKGTTFSKYKQFVNNCFEMLPRQ
ALHAQTLGFIHPTTKEYMEFEAALPADFDSVLNKWRNYIVEPS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatagcaacagcgtgcaggaattagaagagcaggatttatatgaacattttaat
attgttgttgataaaggacagtctttgttaagaatagacaaatttttaatggggcgcatg
gagaatgcttcccgcaatcgtattcagaatgctattgatgccggaaatgtgttggttaat
caaggcactgttaaagcgagctataaggtaaaacctgcagacgagatttcgattgtcttt
cctcatccaccaagagatacggaagtttatccggaaaatattccattggatattgtttat
gaagatgacgatttactggtcgtaaataaacctgcaggcatggttgttcatccgggattt
aataattataccgggactctggtaaatgctttagcctaccattttgaaaaattaccgcaa
ttaccgggaaatgaaggcagaccaggccttgttcaccggattgataaggatacttccggt
ttgttgctgatcagtaaaaacgagatcacgatgaccaaacttgcaaagcagttttttgac
cataccattacccgtaaatatattgctatggcctggggagatattctggaaaatggaacc
gttaccggatacattggaaggagtgcaaaaaaccggattgtgatggatgtttacgatgat
gaagaaaaaggtaagtggtctgtaacacattattcggtattagagcgtttaggatatgta
accttaatcagttgtcagctggaaactggccgcacacaccaaatcagagcgcatatgcaa
catatcggacaccctttatttaacgatgccaattatggtggcgataaaatattgaaagga
acgaccttcagcaaatacaagcaatttgttaataactgctttgagatgttgccacgtcag
gcattacatgcccagaccttagggtttatccatccgaccactaaagaatacatggaattt
gaggctgctttacctgctgattttgattccgtattaaacaaatggagaaactacattgtc
gagccttcttaa
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