Paenibacillus swuensis: SY83_21615
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Entry
SY83_21615 CDS
T04884
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pswu
Paenibacillus swuensis
Pathway
pswu03030
DNA replication
pswu03430
Mismatch repair
pswu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pswu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SY83_21615
03430 Mismatch repair
SY83_21615
03440 Homologous recombination
SY83_21615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pswu03032
]
SY83_21615
03400 DNA repair and recombination proteins [BR:
pswu03400
]
SY83_21615
Enzymes [BR:
pswu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SY83_21615
DNA replication proteins [BR:
pswu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SY83_21615
DNA repair and recombination proteins [BR:
pswu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SY83_21615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF6282
Motif
Other DBs
NCBI-ProteinID:
ANE48448
UniProt:
A0A172TN31
LinkDB
All DBs
Position
complement(4787421..4791134)
Genome browser
AA seq
1237 aa
AA seq
DB search
MNEFVHLHVHSEYSLLDGAARIEDLAETAARNGMKALALTDHGVMYGAIPFYKACVKRGI
KPIIGCEVYLTTGPLKEKGARKDNPIYHLILLAKNEQGYRNLMKICSVAQLEGFHYKPRI
DLEHLAAYAEGIVCLSACLGGEISRHLQHDRQEEALKAALRYRDMFGEDFYLELQDHGLI
EQKKVNAAMIELSRETGIPMAVTNDIHYITEPDHKVQDVLLCIGTGKTVDDQERFKFSTD
QLYFKNSEEMSKLFRHVPEAVVNTSRIADKCNLELTFGTSILPAFEPIPDGFDSESYLKT
LCESGLEARFGKQQSWKDAEFRESVTGRLSYELNVIQTMGFSDYFLIVWDFIRYAHDNGI
ATGPGRGSSAGSLVAYVLRITDVDPIRYKLLFERFLNPERISMPDIDIDFSDERRDEVID
YVARKYGSDRVAQIITFGTMAAKAAVRDVGRVLNLPYHEVDRAAKMIPNMLGITIEKALE
LNPELKKLTETQPKTAELIQMARKVEGMPRHASTHAAGVIISRDPLTHYVPLQAGTEHSA
LTQYSMEHLESIGLLKMDFLGLRTLSIIERTLHWVKVQFGKDIDFHAIPDDDPRTYEMLS
RGDTTGIFQLESAGMRRVLKDLKPSTFEDIVSVLALYRPGPMEFIPKYISGKHGQIQVEY
PHPSLEPILSDTYGIIVYQEQIMQIASAMAGFSLGEADLLRRAVSKKKREVLDEQRAHFV
QGSLKEGYPEDDANKVYDMIVRFADYGFPRAHAAAYGVLAFQTAYLKAHYPVQFMASMLT
AVMGNHRKVAEYIDDCRRMGIDILPPDVNSSEVLFTPQARGTDRNAIGNAVERAAPTEPA
VKEPLAEEVLIETVSPLGGIRFGLAAIKNVGTQAIETIIKERKESVYADLLDFCRKVDLR
VCNKRVIESLIQGGAFDSMQGHRAQLIAMLDETLDAAVKWKKERDDLQLQLFGFVEAVNW
TIEYPEIKPYSHLQQLELERELLGLFISGHPLDSYEDLLRKAETDRILELPELPDGREVW
VAGMIVSQRNIVTKKGQSMAFLELEDRVDKLEAVLFPETWKRYGSLVHKGALVLVRAKLQ
HQDEDIKLLADELIPLDSPELPARLRAMKRPGASSPRAGAGARPAGQAAARAPGPAAPAA
PPAEREQPTAPPAQSAPAAKRQSQKVFVRIAEDRETPAVLSRLKALLQRHAGPLQTVLFY
EREGKLLALNEQHNVKPSPELFGGIAEILGPDAVRVK
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagtttgtacatttgcacgttcacagtgaatatagtttgctggacggcgcggcc
agaattgaagatttagcggaaacggcagccagaaacgggatgaaagccctggcattgacc
gaccacggcgtcatgtacggagcgattccattctataaagcttgtgttaaacggggaatt
aaaccgattatcggctgtgaagtgtatttaacaacggggccgctgaaagagaaaggcgcg
cgcaaggacaatccgatctatcatttaattctgctggccaagaatgaacagggctatcga
aatctgatgaaaatctgttccgttgcacaacttgaaggctttcattacaaaccgcgcatt
gatttggagcacctggctgcatatgcggaaggtatcgtatgtcttagcgcatgtctggga
ggagaaatatcccggcacttgcagcacgaccgccaagaagaagccctgaaagccgccctc
cgctacagagacatgttcggtgaagacttctacctggagctgcaggaccacggtttaatc
gaacagaagaaggttaacgccgccatgatcgagctcagccgggaaacgggtattcccatg
gcggtgacgaatgatattcattacattacggagccggaccataaggtgcaagacgtgttg
ctgtgtatcgggacaggcaaaaccgttgatgatcaagagcgctttaagttctcgacggac
cagttgtatttcaaaaatagtgaagaaatgtccaaactttttcggcacgtgccagaagct
gtggtcaatacgtcacggattgccgataagtgtaatctggagcttacgttcggaacatcg
attctccccgcctttgaacccattcccgatggattcgacagcgaaagttatttaaagaca
ttgtgcgaatcggggctggaggcgcgtttcggcaaacagcaaagctggaaagatgcggaa
tttcgcgaatccgtgacgggcagactgagctatgaattaaatgtgattcaaacgatggga
ttctccgattatttcctgatcgtttgggatttcatccgctacgctcatgataacggcatt
gccaccggaccgggaaggggctcgtcagccggcagtttggtagcctatgtgctccggatt
accgatgtggatccgatccggtataagctgttgtttgagcgtttcttaaatcccgagcgg
atttccatgccggatatcgatattgacttcagtgatgaacgacgcgacgaggttatagat
tatgtggcgcgtaaatatggctccgaccgggttgcccagattattaccttcggaacgatg
gctgctaaagccgcggttcgcgatgtcggacgggtgttaaatctgccgtatcatgaagta
gaccgcgccgcgaagatgattccgaacatgctggggatcacgatcgagaaagcgctggaa
ctgaacccggagctgaagaagcttacggaaacccagccgaaaacagcggagctcatccag
atggcgcgtaaagtggaaggcatgccccggcatgcttcgacccatgcggcaggcgttatt
atttcccgtgacccgctgacccattatgttcctctgcaagcggggacggagcattcggcg
ctgactcaatattccatggaacacctggaatcgatcggacttctgaagatggactttctg
gggctccggacgttgtccattattgagagaacgttgcattgggtgaaggtgcaattcggc
aaggacatcgatttccatgcgattccggatgacgacccgcggacttacgaaatgttaagc
cgcggtgacacaacgggcatctttcaactggaatccgcagggatgaggcgcgtgctcaag
gacctcaagccctcgacgttcgaggatattgtgtcggtgctggccttgtaccgtccgggt
ccgatggaatttattccgaaatatatcagcggcaagcatggtcagatccaggttgagtac
ccgcatccctctctggagccgattctgtccgacacctatggcatcattgtttaccaggag
cagatcatgcagattgcctcagccatggccggattctctctcggcgaagcggatttgctg
cggcgcgccgtctcgaagaagaagcgggaagtgttggacgagcaacgcgcgcatttcgtc
caagggagcttgaaggaaggctacccggaagacgacgcgaataaggtctatgacatgatt
gtccgctttgcggattacgggtttccccgggctcatgccgcggcatatggtgtcctcgcg
ttccagacggcttatctcaaagcccattatccggtgcaatttatggcatccatgctcacg
gctgtcatgggaaatcaccgcaaagtggcggaatatattgatgactgccgccgcatgggc
atcgatattcttcccccggatgtgaacagcagcgaagtgctgtttacgccgcaggcgaga
gggacggacaggaatgcgatcgggaacgcggtagagcgggctgcgccaacagaaccggca
gttaaggagccccttgcagaagaagtgcttatagaaaccgtttccccactgggaggcatt
cgtttcggactggccgccatcaagaatgtgggtacgcaagccatagaaacgatcattaaa
gaacgtaaggagtcggtctatgccgacttactggatttctgccgcaaggtggaccttcgc
gtctgtaacaagcgggtaattgaatccctcattcaggggggcgcatttgattccatgcaa
gggcatcgggcgcagttaatcgctatgctggacgagacgctggatgcggccgtcaagtgg
aagaaggagcgggatgatcttcaacttcagttgtttggcttcgtggaggcggtaaactgg
acgatcgaatatccggagattaagccctactcccatcttcaacagctggaactagaacgc
gagttgctcgggttgttcatctccggccatccgctggacagctatgaagatctgctccgc
aaggctgaaaccgatcgcattctggagttgccggagcttccggacggacgggaagtgtgg
gtcgcggggatgatcgtctcccaacgcaacatcgttacgaagaaaggccagagtatggcc
tttctggaattggaggaccgcgtcgacaagctggaagcggtactctttcccgagacgtgg
aagcggtatggttcgctggtccacaaaggcgctctggtcctcgtccgtgcgaagctgcag
caccaggacgaggacatcaagctgctcgcggacgagctgatcccgctcgacagccccgag
ctgcccgcgcgtttgcgggcgatgaagcgccccggcgcctcatcgccccgcgcgggcgct
ggcgcgcggccggccggccaagctgccgcccgcgcacccgggccggctgcgccggccgct
ccgcccgcggagcgcgagcagccgaccgcgcccccggcgcagtcggctcccgccgccaag
cggcagagccagaaggtcttcgtgcggatcgccgaagaccgggagacgccggcggtgctg
agccggctgaaggcgctgctgcagcggcatgcggggccgctgcagaccgtgctgttctac
gagcgcgaggggaagcttctcgcgctcaacgaacagcacaacgtgaagccctcacccgaa
ctgttcgggggcattgccgagattcttggacccgacgcggtccgggtcaaataa
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