Psychrosphaera ytuae: J1N51_07420
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Entry
J1N51_07420 CDS
T07123
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
psym
Psychrosphaera ytuae
Pathway
psym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J1N51_07420 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psym03019
]
J1N51_07420 (pcnB)
Enzymes [BR:
psym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
J1N51_07420 (pcnB)
Messenger RNA biogenesis [BR:
psym03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
J1N51_07420 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
AAA_17
Ribosomal_S4
TcdB_toxin_midC
Motif
Other DBs
NCBI-ProteinID:
QTH65332
UniProt:
A0A975DDV1
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All DBs
Position
1694207..1695643
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AA seq
478 aa
AA seq
DB search
MIPRDQHPISRKQISPNALKVLYRLKDNGYEAYLVGGCIRDILLGLQPKDFDVVTNATPE
QVKACFSNCRLIGRRFRLAHIMFGREIIEVATMRGHHQSSDDDVTSVDIEQKQEQPSPAV
AKKISKQSDEGQLLRDNVYGTIDEDAERRDFTINSLYYDIRNFDLLDFANGMADIEKGVI
DLIGDPETRYREDPVRMLRAVRFATKLNMTIAKRTESPIYELGHLLRNIPPARLFDESLK
LLLSGKALANFEMMRHYGLFKYFFPAAEQVLTGNPEDKEERMMKLMFTNTDTRINADKSI
SPAFVLAAIYWYPLEAHAQELELESGLSPYDAFQLAINDILHRAVQSVAIPKRFTANMRD
IWNSQHRLRKTQGKRPLQMLENARFRAAYDFLLLRAEIEGGELEEIADFWTHLQETDEGK
RAMADAKRNAGQRRFEGRPEGRSDDRSKSGPKRNAKYRSNRRKKKPSGNRSSKSNNES
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
attataccccgtgaccaacatcctatttcgcgcaagcagattagccctaatgcgttaaaa
gtattgtaccgcctaaaagacaacggttacgaagcgtatttagtaggtggctgtattcga
gatattttactcggcttacaacctaaagactttgacgtcgtaacgaatgccacaccggag
caagttaaagcctgctttagtaactgtcgcttaatcgggcgccgcttccgtttagcgcac
atcatgtttggtcgtgaaattatcgaagttgcgacaatgcgaggtcaccatcaaagcagc
gatgatgatgtaacttctgtcgacatagaacaaaaacaagagcaaccaagtcctgccgtt
gccaaaaaaatatctaagcaaagtgatgaaggccagcttttacgcgacaacgtttacggc
acaattgacgaagacgcagaacgtcgtgacttcacaattaacagcttgtattacgatatc
cgcaactttgatcttctcgactttgccaatggtatggcggacatcgaaaaaggcgttata
gacctcattggtgatccagaaacgcgttatcgcgaagaccctgtgcgtatgttacgagcg
gttcgctttgcgactaagctcaatatgacgattgccaagcgcaccgaatcgccaatttat
gagctaggtcacttgttgcgcaacattccaccagcgcgcttgtttgatgagagtttaaag
ttattactttcgggtaaagcactagctaactttgaaatgatgcgccattacggcttattt
aaatacttcttcccggccgcagaacaagtgttaacaggtaaccctgaagacaaggaagag
cgcatgatgaagctaatgttcaccaatacggacacgcgcatcaatgcagataaaagtatt
tctccagcttttgtgttggctgctatttactggtatccacttgaagctcacgcacaagag
cttgaactagaaagtggtttatcgccctacgatgccttccagttagcaataaacgacatt
ttgcaccgcgccgtacaatcggtggcgatccctaaacgctttacggctaatatgcgtgac
atttggaactcacaacatcgcttgcgtaaaacccaaggcaaacgtccattacaaatgctc
gaaaatgcccgcttccgagctgcgtacgacttcttgttgttacgtgctgaaattgaaggt
ggcgagttagaagaaattgcggatttttggactcatttacaagaaactgacgaaggcaag
cgcgcgatggctgatgcaaagcgcaatgctggccaacgtcgttttgagggacgtcctgaa
ggacgctctgatgatcgttcaaaatcaggccctaagcgcaacgccaaataccgtagtaac
cgtcgaaaaaagaaacctagcggtaaccgcagttcaaaatcaaacaacgagtcctag
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