Psychrobacillus glaciei: PB01_19950
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Entry
PB01_19950 CDS
T06231
Name
(GenBank) RNA polymerase sporulation sigma factor SigH
KO
K27000
RNA polymerase sigma-H factor
Organism
psyo
Psychrobacillus glaciei
Brite
KEGG Orthology (KO) [BR:
psyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyo03021
]
PB01_19950
Transcription machinery [BR:
psyo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PB01_19950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_23
HTH_16
HTH_38
MSP1_C
Sigma70_r4
Sigma70_ECF
HTH_28
HTH_29
HTH_Tnp_Tc3_1
Terminase_5
HTH_30
DUF1664
DS
HTH_36
Lebercilin
Motif
Other DBs
NCBI-ProteinID:
QFG00884
UniProt:
A0A5J6STP6
LinkDB
All DBs
Position
complement(4154584..4155228)
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AA seq
214 aa
AA seq
DB search
MEKAEHNLQQLDSLQDEELVEMVHQGNTEALDYLITKYRSFVRMKGRSYFLIGADREDIH
QEGMIGLYKAIRDFKEEKLASFRAFAELCITRQIITAIKTATRQKHIPLNSYVSLDKPIY
DEESDRTLMDMIAGSVIDDPEELIINREDYNSMEEKMTEILSELEQQVLVLYLDGQSYQE
ISEELNRHVKSIDNALQRVKRKLERYMEIGSNYV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaggcggaacataatctacaacaattggatagtttacaagatgaggaacttgta
gagatggttcatcaagggaacactgaagcactagattatttaataacgaagtaccgctcg
ttcgttcgtatgaaaggcagatcctactttttaattggcgctgacagagaagatattcac
caagaaggcatgattggattatataaagcaattcgagattttaaggaagaaaagctagca
tctttccgagcgttcgccgagttatgcattactcgacaaattattacagctattaaaact
gcaactcgtcaaaagcatattccgctaaactcatatgtatcattagataaacctatctat
gatgaagaatctgaccgaactttgatggatatgattgctggttcggtaatagatgaccca
gaagagttaattataaatcgggaagattataatagtatggaagagaaaatgacggagatt
ttaagtgaactggagcaacaagtgcttgtgttatatttagatgggcagtcttaccaagag
atttcagaagagttgaatagacatgtgaaatcaattgataatgcgcttcaaagagtgaaa
cgaaaattagagcgttatatggagattggtagtaattatgtataa
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