Psychrobacter sp. PAMC27889: E5677_07495
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Entry
E5677_07495 CDS
T06076
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psyp
Psychrobacter sp. PAMC27889
Pathway
psyp03030
DNA replication
psyp03430
Mismatch repair
psyp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E5677_07495 (dnaE)
03430 Mismatch repair
E5677_07495 (dnaE)
03440 Homologous recombination
E5677_07495 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyp03032
]
E5677_07495 (dnaE)
03400 DNA repair and recombination proteins [BR:
psyp03400
]
E5677_07495 (dnaE)
Enzymes [BR:
psyp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E5677_07495 (dnaE)
DNA replication proteins [BR:
psyp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E5677_07495 (dnaE)
DNA repair and recombination proteins [BR:
psyp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E5677_07495 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QCB30842
UniProt:
A0A7Z2B591
LinkDB
All DBs
Position
1808943..1812632
Genome browser
AA seq
1229 aa
AA seq
DB search
MAFVHLGIHSEYSITDSIVRIKPLVKAAAADNQRALALTDLSNLYATVKFYRACLGAGIK
PIIGSEVIMDNEDTRLTLLAMNNEGYQNITRIVSLGFTEGRADPVNHGTPVIKRRHILEH
AAGVIVLLAEKSDVGQALVGSMPEKADELLAEWQAQFHDRLYFAIKRTNRAGEDAFIKAA
IQSGAKHNIPIIAHNDVRFLQQDDFDAHEARVCIAGSYVLADPSRPQTYSDEQYLKTQEQ
MAQRFADIPQVIDNTLRLATRCNVSLTLGINVLPDFPVPEGETIETFFRSESQRGLDHRL
DKLFPVETRSDNWSDIRQKYDERLEYELEVILSMGFPGYFLIVMDFIRWAKANGVPVGPG
RGSGAGSLVAYALNITDLDPIHYDLLFERFLNPERVSMPDFDIDFCIEGRDRVIDYVAQT
YGREAVSQIITFGTMAAKAVVRDVARVQSKSYFLANKISKLIPKTPGITLSQALEQEPQL
KDLISNPDNMDYEDAIEIWEMAIKLEGVCRNVGKHAGGVLIAPHKITDFSAIYCDDEGHR
VSQFDKDDVEAVGLVKFDFLGLRNLTVINAAVENINLRRAKEGVDALVLEDLPLDDAKAY
KLLQDAKTTAVFQLESMGMKKYLAKLQPTNIEDVIAMCALYRPGPLDAGMVEMYIDRKHG
REEVIYDHPNLEPILENTNGVIVYQEQVMQISQVMAGYSLGGADMLRRAMGKKKPEEMAK
QRDIFVTGATSQGIDEVTSGGVFDLMEKFAGYGFNRSHSAAYGVLAYQTAYLKQYYPAEF
MAAVLTSDMNNTDNVVFFINDCRENFGLTVVNPSVNRSEWHFVADTPTNIIYGLGAIKGV
GEGAVESIVEARRTDGPFKDLYDFCRRVDIKKVNKRTLEALVSAGCFDDFAATLRPDLPA
DTAYEIRGALMSQLPNAVQAAEQDRQNNELGMMDLFGEMDGVVAAPPLVMTPELIWGDKH
RLKAEKNTLGLYLTGHPINEYLDELKRYTSGARLNKLTDTGYNGSCYFSGLIIDIANFGN
RNVITLDDGTSRLEVSCYAERFNRVKEQLKVDEVVIIKGSIRERDGRLFARLDNAMSIVD
ARLRWLKKISIKVHASDINLLMRLQPLLKSAQADIIPAPRLGYSDEQNESESYGSDSAYD
PAMGGSLYDEDGNDLLAVENEVSQYGNNALSNTDTSINDNCLPLGLSIYEEFGIANVSLS
EHWRIYPNDDNLQQLKTMVNEDSLHFHYS
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgtacaccttggcattcacagcgaatattccatcactgattctatcgtgcgt
atcaagccgcttgtcaaagctgcggcagcggacaatcaacgcgcacttgcactgacagac
ttatcaaacctatatgcgacagtgaagttctaccgtgcttgtttgggcgctggtatcaag
ccgattattggcagcgaagtcattatggataatgaagacacgcgcctgacattgctggca
atgaacaacgaaggttatcaaaacatcactcgtattgtatcgcttggctttactgaaggc
cgtgctgaccctgtcaatcatggtacgcctgtaattaaacgtcgtcatatcttagagcat
gcagcaggcgtaattgtactgctcgctgaaaaatcagatgtgggtcaggcgttggtcggt
tctatgccagaaaaagccgacgagctgcttgctgaatggcaagctcaatttcatgatcgt
ttgtattttgccatcaagcgcaccaatcgcgcgggagaagacgcttttattaaggcggct
atacaatcaggcgccaagcataacattcctattattgcgcacaatgatgtgcgtttttta
cagcaagacgattttgatgcgcacgaagcgcgtgtttgtattgcaggttcctacgtattg
gctgatccaagtcgtccacaaacctactccgatgagcaatatctaaagacacaagagcaa
atggcgcagcggtttgctgacattccgcaggtgattgataatactttgcgtttggcaacg
cgctgtaatgtgtctttgacccttggtattaatgtactacctgattttccagtgcctgaa
ggcgaaacgattgaaacgttttttcgttcagagtcgcagcgcggtcttgatcatcgatta
gacaaactgtttcctgttgagacacgcagcgataattggagcgacattcgtcaaaaatac
gatgagcgtctagagtacgagttagaagttattttatctatgggttttcccggttacttc
ttaatcgtcatggactttattcgctgggcaaaagccaatggcgtacctgtggggccaggt
cgtggctctggtgctggatcgcttgtcgcctatgcgcttaacatcacagaccttgatccg
attcattatgatctattgtttgagcgcttcttaaaccctgaacgtgtatccatgcccgat
tttgatattgacttttgtatcgaagggcgcgaccgtgttattgattatgtagcgcaaact
tatggacgcgaggcagtctcgcagattatcacttttggtacgatggcggcaaaagcggtg
gtgcgtgatgtggcgcgcgtacaaagcaaatcatactttttggcaaacaaaatatctaaa
cttattcctaaaacaccgggcatcacgcttagccaagcgctagagcaagagccgcagctc
aaagacttaatctccaatcctgataatatggattatgaagatgccattgagatttgggag
atggccattaagcttgaaggtgtgtgccgaaacgtgggcaaacatgccggtggcgttctc
attgctccgcataaaattaccgattttagtgccatttattgtgatgatgaggggcaccgt
gtcagccaattcgataaagatgatgttgaagccgtgggactggttaaatttgactttttg
ggtttgcgtaacttaaccgttatcaatgccgcggttgaaaatatcaatctacgccgtgcc
aaagaaggtgtggatgctttggtattagaagacttgcctttagatgacgccaaagcttat
aaactactgcaagatgccaagaccacggctgtctttcagcttgaaagtatgggcatgaag
aaatatctggccaaattacagccgaccaatatcgaagacgtgatcgccatgtgtgcgttg
tatcgtccaggtccccttgacgctggcatggtagagatgtatatcgaccgtaagcacggc
cgtgaagaagttatctacgatcatcccaatcttgaacccatattagagaacaccaacggc
gttattgtgtatcaagaacaagttatgcaaatctcgcaggtcatggcaggctatagcttg
ggcggcgcagatatgctgcgccgtgccatgggtaagaaaaaaccggaagaaatggccaaa
cagcgcgatatttttgtgacaggtgccacctcacaagggattgatgaagtcacgtcaggt
ggtgtgtttgacttgatggaaaagttcgcaggttacggttttaaccgctctcattccgca
gcttacggtgtattggcatatcaaacggcgtatttgaaacagtactaccctgctgaattt
atggcagcggtattgacctctgatatgaacaacaccgacaacgtggtgttctttatcaat
gactgccgcgaaaacttcggtttgaccgtcgtcaacccttctgttaaccgcagtgaatgg
cattttgttgctgacacaccgaccaatatcatttatgggctgggtgcgattaaaggggtt
ggtgagggcgcggttgaatccattgttgaagcacgccgcacggacgggccgtttaaagac
ttatacgatttttgtcgccgcgtagacatcaagaaagtcaataaacgcacacttgaagct
ttggtgagcgcaggctgttttgatgattttgccgccactttacgacctgatttgccagca
gataccgcttatgagatccgcggtgcattgatgagtcaattgccaaatgctgtacaagca
gctgagcaagatcgtcagaacaatgagcttggcatgatggatctgtttggtgaaatggat
ggcgtggttgctgcaccgccacttgtgatgacgccagagctgatttggggagataaacat
cgccttaaagctgaaaaaaacaccttaggtctgtacttaacaggtcatccgattaatgaa
tacttggatgagctaaaacgctatacctcaggtgctcgtcttaacaagctgacagacact
ggctacaatggcagctgttacttctcaggattgattatagatattgctaactttggtaat
cgcaatgttattactttagatgacggtacgtctcgtcttgaagtcagctgctatgcagag
cgtttcaaccgtgttaaagagcaactaaaagttgatgaagtggtgattattaaaggcagt
attcgtgagcgtgatggacgtttatttgcccgtcttgataatgccatgagtatcgttgat
gctcgcttgcgttggcttaaaaaaatcagtatcaaggttcatgctagtgacattaatctg
ctgatgcgtctgcaacctttgcttaaatcagcacaagcagacattatccctgcgccgcgc
ttaggatacagtgacgagcagaacgaatctgaaagttatggcagcgatagcgcttatgat
cctgctatggggggaagtttatacgatgaagatggtaatgacttattggctgtagagaat
gaggtgagtcaatatggcaataatgcactgagcaatacagacacctctattaatgataac
tgtctgccgcttgggttaagcatttacgaagagtttggtattgccaatgtcagtttatca
gagcactggcgtatctaccctaacgatgacaatttacagcaattaaaaaccatggttaat
gaagacagcttacactttcattacagctaa
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