Pseudomonas syringae CC1557: N018_18735
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Entry
N018_18735 CDS
T03014
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psyr
Pseudomonas syringae CC1557
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psyr03009
]
N018_18735 (rimO)
Enzymes [BR:
psyr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
N018_18735 (rimO)
Ribosome biogenesis [BR:
psyr03009
]
Prokaryotic type
ribosomal protein modification factors
N018_18735 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AHG42134
UniProt:
W0MU74
LinkDB
All DBs
Position
4158234..4159577
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AA seq
447 aa
AA seq
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MSTVTTPSAPKVGFVSLGCPKALVDSERILTQLRMEGYEVVATYEDADVVVVNTCGFIDT
AKAESLEVIGEAIKENGKVIVTGCMGVDASVIRNVHPSVLSVTGPQQYEQVVNAVHDVVP
PRKDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AKRLVKSGVKELLVISQDTSAYGVDVKYRTGFWDGQPIKTRMTELCQALGSMGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKILKLMKRPAFEDKTLARIKNWREQCPE
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDAAIVPDDVK
QDRWDRFMAHQQAISAARLQMKIGKEIEVLIDEVDERGAVGRCFFDAPEIDGNVFIGLDD
DSTVQPGDKIMCRVTDADEYDLWAEVL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgttaccacgccgtccgcccccaaggtcggattcgtttctctgggttgcccg
aaggcgctcgttgattccgaacgcatcctgacccaactgcgcatggaaggttacgaagtc
gttgcgacctacgaggacgctgacgtggtcgtggtcaatacctgcggcttcatcgacacg
gccaaggccgagtcgctggaggtgatcggtgaagcgatcaaggaaaacggcaaggtgatc
gtgaccggctgtatgggcgtcgatgcgagcgtcattcgcaacgtacacccgagcgtgctg
tcggtgaccggcccgcagcagtacgagcaggtggtcaatgccgtgcacgacgtggtgccg
ccacgcaaggatcacaatccgctgatcgacctggtgccgccacaaggcatcaagctgaca
ccgcgccattacgcttatctgaaaatctccgaaggctgcaatcacagctgcagcttctgc
atcatcccgtcgatgcgcggcaagctggtcagccgcccggttggcgacgtgctggacgaa
gccaagcgtctggttaaatccggtgtgaaagagctgctggtgatttctcaggacaccagc
gcctacggcgtcgatgtcaaataccgcactggattctgggacggccagccaatcaagacc
cgcatgacagagttgtgtcaggcactcggctcgatgggcgtctgggttcgcctgcactac
gtctacccgtatccgcacgtcgacgaactgattccgctgatggcagccggcaagatcctg
ccgtacctggatattccgttccagcacgccagcccgaaaatcctcaaactgatgaagcgc
ccggccttcgaagacaagaccctggcacgcatcaagaactggcgcgaacagtgccctgag
ctgattatccgctcgacgttcattgtcggcttccctggcgaaaccgaagaagacttccag
tacctgctggactggctgaccgaggcccaactggatcgcgtcggctgtttccagtactcg
ccggtcgaaggcgcgcctgccaatctgctggacgccgccatcgtgccggatgacgtcaag
caggatcgctgggaccgtttcatggctcatcagcaggcaatcagcgctgcacgcctgcaa
atgaagatcggcaaggaaatcgaagtactgatcgacgaagtcgacgaacgcggcgccgtg
ggccgttgcttcttcgacgcaccggaaatcgatggcaacgtctttatcggtctggacgat
gacagcactgtccagcctggcgacaagatcatgtgccgcgtgaccgatgccgatgaatac
gacctgtgggccgaggtgctctaa
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