Pseudomonas taetrolens: NCTC10697_03427
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Entry
NCTC10697_03427 CDS
T08085
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ptae
Pseudomonas taetrolens
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptae03021
]
NCTC10697_03427 (rpoS)
Transcription machinery [BR:
ptae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC10697_03427 (rpoS)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
KinB_sensor
Motif
Other DBs
NCBI-ProteinID:
SQF87630
LinkDB
All DBs
Position
1:complement(3664017..3665021)
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AA seq
334 aa
AA seq
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MALSKEAPGFDIDDEVLLMSSAIDSDLMSEDDDSTPTARTKSKKASVLKQHKYIDYTRAL
DATQLYLNEIGFSPLLSPAEEVHFARLSQSGDPAGRKRMIESNLRLVVKIARRYVNRGLS
LLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKEL
NVYLRAARELTQKLDHEPSPEEIANLLEKPVAEVKRMLGLNERVSSVDVSLGPDSDKTLL
DTLTDDRPTDPCELLQDDDLSQSIDQWLSELTDKQREVVIRRFGLRGHESSTLEDVGLEI
GLTRERVRQIQVEGLKRLREILERNGLSSESLFQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggctcttagcaaagaagcgccggggtttgacatcgacgatgaggtgctccttatgagc
tccgctatcgacagcgacttgatgtcagaagacgatgattcaacccctacagcccgcacc
aagtccaaaaaagcatctgttttaaaacagcacaagtacattgattacacgcgggcgctc
gatgcgacgcagttgtacctcaatgaaattggcttttccccgttgctctcccccgcagaa
gaagttcattttgcccgcttgtctcaaagcggtgatccggccgggcgcaaacgcatgatt
gagagcaatttgcgactggtggtgaaaatcgcccgtcgttatgtcaatcgtggtctgtcg
ttgctggacctgatcgaagagggcaacctgggattgattcgggcagttgaaaagttcgat
cccgaacgcggatttcgcttctcgacatacgccacctggtggattcgccaaacgattgaa
cgggcgatcatgaatcaaacccgtaccattcgtttaccgatccatgtcgtcaaagaactc
aacgtctaccttcgagctgcgcgtgaactcacgcaaaagcttgatcacgaaccctctccc
gaagaaatcgccaatctgctcgaaaaacccgttgccgaggtcaagcgcatgcttgggctt
aacgagcgggtgtcgtcggtagatgtttctttgggcccagattcggacaagacactgctt
gataccctgaccgatgatcgtcctacagacccttgtgagctgcttcaggacgatgatttg
tcgcaaagtattgatcagtggttgtctgaacttacagacaagcagcgcgaggtggtcatt
cgccgcttcgggttgcgcggtcatgaaagcagtacgcttgaagatgttgggctggagatt
ggccttacgcgtgagcgtgtgcggcaaattcaagttgaggggctcaagcgcctgcgcgag
atccttgaacgaaacggtttgtcgagtgagtcgctgttccagtaa
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