Pseudomonas taiwanensis: ICN73_14880
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Entry
ICN73_14880 CDS
T09297
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ptai
Pseudomonas taiwanensis
Brite
KEGG Orthology (KO) [BR:
ptai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptai03032
]
ICN73_14880 (topA)
03400 DNA repair and recombination proteins [BR:
ptai03400
]
ICN73_14880 (topA)
Enzymes [BR:
ptai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ICN73_14880 (topA)
DNA replication proteins [BR:
ptai03032
]
Prokaryotic type
DNA Topoisomerases
ICN73_14880 (topA)
DNA repair and recombination proteins [BR:
ptai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ICN73_14880 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QOJ89175
UniProt:
A0A7L9G9X1
LinkDB
All DBs
Position
3328797..3331406
Genome browser
AA seq
869 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAAGEA
PALSPKEKARRQLVARMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLDR
EGEAIAWHLREAIGGDDTRYKRVVFNEITKKAIQEAFSQPGELDIDRVNAQQARRFLDRV
VGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWEIHADLGTAKNAKV
RFEVAREKGEAFKPLNEAQAMAALEKLKASSYSVVKREDRPTSSKPSAPFITSTLQQAAS
NRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADALDMARSYIEREFGKQYLPEAPLV
YGSKEGAQEAHEAIRPSDVNTHPTKLSGMERDAERLYELIWRQFLACQMPPAQYLSTSVT
VAAGDFELRAKGRILKFDGYTRVLPQQSKPGEDDVLPEMVQGEALKLIQIDPSQHFTKPP
ARFTEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVTLHNRRFYSEKMGDIVTERLSESF
SNLMDYGFTADMEENLDDVAQGERDWKNVLDEFYGDFSKKLQTAESSEDGMRANQPTMTN
IPCKECGRPMMIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESRVLL
GKHRCPICATAMDAYLLDEKHKLHICGNNPDCVGYEIEEGNYRIKGYEGPSLECDKCGSE
MQLKTGRFGKFFGCTNPACKNTRKLLKSGEAAPPKMDKVDMPELKCEKVDDTYVLRDGAS
GLFLAASQFPKNRETRAPLVLEIVPHKHEIDPKYHFLCDAPQKDPDGRPAVIRYSRKTKE
QYVQSEVDGKPTGWKAFYDGNAWKVEDKR
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcgctggtcattgtggaatccccggccaaggccaagaccatcaacaagtac
ctgggcaaccagtacgtggtgaagtcgagtatcggccatatccgagacctccccaccagc
ggttcggccagcgcgagcaaagagccggccgccaagcgtggcaaggctgcgggtgaggcg
ccggcgctttcgccgaaagagaaggcccgccgccagctggtggcacgcatgggcgtcgac
cccgaccatggctggaaggccaagtacgagatcctgcctggcaaggaaaaggtgatcgaa
gagctgcgccgcctggccaaggatgccgacaccatctatctcgcaaccgacttggaccgc
gaaggggaagccattgcctggcacctgcgcgaggccatcgggggtgacgacacccgctac
aagcgcgtggtgttcaacgaaattaccaagaaggccattcaggaagcgttctcgcagcca
ggcgagctggacatcgaccgggtcaacgcccagcaggcgcggcgtttcctcgaccgcgtg
gtcggttacatggtttcgccgctgctgtgggccaagattgcccgtggcctgtccgctggc
cgtgtgcagtcggtagcggtgaagctggtggttgagcgagagcgtgagatccgcgcgttc
atcccggaagagtattgggagatccacgccgacctcggcaccgccaagaacgccaaggtg
cgtttcgaggtggcgcgcgagaagggcgaggccttcaagccgctgaacgaagctcaggcc
atggctgcactggaaaagctcaaggcttccagttacagcgtggtcaagcgcgaagaccgc
ccgaccagcagcaagccatcggcaccgttcattacgtccaccttgcagcaagcggccagt
aaccgcctgggcttcggtgtgaagaaaaccatgatgatggcccagcgcttgtacgaagcg
ggttacatcacctacatgcgtaccgactcgaccaacctgtcggctgacgccctggatatg
gcacgcagctacatcgagcgggagttcggcaagcagtacctgccggaggcgccactggtt
tacggcagcaaggagggcgcccaggaggcgcacgaagcgattcggccttctgacgtgaat
acccacccgaccaagctcagcggcatggagcgtgacgccgagcgcctgtacgagctgatc
tggcgccagttcctggcgtgccagatgccgccagcgcagtacctgtccaccagtgttacc
gtcgctgccggcgatttcgagctgcgtgccaagggccgcatcctcaagttcgacggctac
acccgtgtgctgccacagcagagcaagccgggcgaagacgacgtgctgccagagatggtt
cagggtgaggcgctgaaactgatccagatcgacccgagccagcactttaccaagccgcct
gcacgctttaccgaagccagcctggtcaaggaaatggaaaagcgcggcattggccgccca
tcgacctacgcggcgatcatttccaccatccaggaccgtggctatgtgacgctgcacaac
cgccgcttctactccgagaagatgggcgatatcgtcaccgagcgcttgtcggagagcttc
tccaacctgatggactacggctttaccgccgacatggaagagaacctcgacgacgtggcc
cagggcgagcgtgactggaagaacgtgctcgacgagttctacggcgatttcagcaaaaag
ctgcagactgccgagtccagcgaagacggcatgcgcgccaaccagccgaccatgaccaac
attccgtgcaaggaatgtggtcggccgatgatgattcgcaccgcctctacaggcgtgttc
ctgggctgctctggctacagcctgccgccgaaagagcgctgcaaggctaccgtcaacctg
gtgccgggcgacgagattgccgctgacgacgagggcgagtcggaatcgcgcgtgttgctg
ggcaagcaccgttgcccgatctgcgccacggcgatggatgcctacctgctggacgagaaa
cacaaactgcacatctgcggtaacaacccggattgtgtcggttacgagatcgaagaaggc
aactaccgcatcaagggttacgaagggccgagcctggagtgcgacaagtgcggtagcgag
atgcaattgaagaccggccgtttcggcaagttcttcggctgcaccaacccggcgtgcaag
aacacccgcaagctgctcaagagcggcgaggcggcgccaccgaagatggacaaggtggac
atgccggagctcaagtgcgagaaggtcgacgatacctacgtgctgcgcgacggtgcttct
gggttgttcctggctgccagccagttccccaagaaccgcgaaacccgtgcgccgctggtg
ctggagatcgtgccgcacaagcatgagattgacccgaagtaccacttcctgtgcgatgcg
ccgcagaaagacccggatggccgcccggcggtgattcgctacagccgcaagaccaaggag
cagtacgtgcagtccgaggtcgatggcaagccgaccggctggaaggcgttttacgacggc
aatgcctggaaggttgaagacaagcgctga
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