Parageobacillus toebii NBRC 107807: DER53_00370
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Entry
DER53_00370 CDS
T06505
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ptb
Parageobacillus toebii NBRC 107807
Pathway
ptb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DER53_00370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptb03400
]
DER53_00370
Enzymes [BR:
ptb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DER53_00370
DNA repair and recombination proteins [BR:
ptb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DER53_00370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
AAA_22
AAA_16
HHH_5
AAA
T2SSE
UvrD_C
AAA_12
AAA_28
NTPase_1
Zeta_toxin
nSTAND3
AAA_18
TsaE
Motif
Other DBs
NCBI-ProteinID:
QIQ31519
UniProt:
A0A6G9J018
LinkDB
All DBs
Position
complement(63768..66122)
Genome browser
AA seq
784 aa
AA seq
DB search
MQQQESFVLGETSFIKGAYISTIFHNEANLYSVVRVRVVETNEAYDEQEVVVTGYFPKMN
EHDTYIFYGKFHDHPKFGRQYVVEHFRKQFPNTKDGIIHYLSSDLFKGIGKKTAKAIVEA
LGENAISKILADPSVLDDVPKLSKQKAKELYDTLRAHEGLEQTMIALSQFGFGPQLSMKI
YQVYQDETLSVIQQNPYQLVEDVEGIGFGRADELGYRLGISGSHPARIRAACLFVLERDC
LQEGHVYVTKEQLMTSAKQLLEAKRSEAISEEAIEQMLLMLAEEGKLINEEEKFYIPSLY
FAEKGIVTNVKRLLQQTEAVITFPESEFLLALGRLEERLSVQYAPLQKEAIRQAISSPLF
ILTGGPGTGKTTVIKGIVEIFADLHGLSLDPKDYTKDHPFPILLAAPTGRAAKRMSEATG
LPAVTIHRLLGWNGAEGFTHDEDEPIRGKLLIVDEMSMVDTWLANQLFKSIPDGMQVILV
GDEDQLPSVGPGQVLKDLLQAGVIPTIRLTEVYRQAEGSSIIELAHQMKNGVIPPDLTAQ
KADRSFIRCQTGQIAEVVRQIADNARRKGFAVKDIQVLAPMYRGPAGIDRLNQVLQDLFN
PKSEKKRELSVGDVVYRVGDKVLQLVNQPDDNVFNGDIGEIVAIFYAKENTEKQDLVVVS
FDGIEVTYSRQDLSQITHAYCCSIHKSQGSEFPIVILPVVKSYYRMLKRNLLYTAVTRSK
QFLILCGEEEAFKLGIARSDDGARQTTLTEKLQRSLAPITEGELPMEDANIGMENVSPYD
FMND
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
ttgcagcaacaagaatcgtttgttttaggggaaacatcgtttattaaaggggcatatatt
tctacgatttttcataatgaagcaaatttatattccgtcgttcgcgttcgagtggtggaa
acgaacgaagcatatgatgaacaagaagttgttgtaactggatatttccccaaaatgaat
gagcatgatacgtatattttttatggaaaatttcacgaccacccgaagttcgggcggcaa
tatgttgtggaacatttccggaaacaatttccaaacacaaaagacggaatcattcattac
ttatcaagcgatttgtttaaaggaattgggaaaaaaacggcaaaagcgatcgtcgaagcg
ctcggcgaaaatgctatttcgaaaattttagcggatcctagcgtattggacgatgttccg
aaattgtcaaaacaaaaagcaaaagagttgtatgatacgttgcgtgcccatgaagggtta
gaacaaacgatgattgctctttctcaatttggttttggtccgcaattgtcgatgaaaatt
taccaagtatatcaagatgaaaccctttctgttattcagcaaaatccataccagcttgtc
gaagatgtggaagggatcggatttggccgcgccgatgaattaggataccgtcttggcatt
tccggcagccatcctgctcgcattcgtgctgcttgtttgtttgtgttagagcgggattgt
cttcaagaagggcatgtttatgtgacgaaagaacagcttatgacaagcgcgaaacagctt
ttggaggcgaaacgaagcgaagcgatcagtgaggaagccatcgagcaaatgctgttaatg
cttgcggaggaaggaaaattaatcaatgaagaggaaaaattttatattccatccctttat
tttgccgaaaaaggaatcgtaaccaatgtaaaacgtcttttgcaacaaacagaagcagtg
ataacgtttccggaatcggaatttttattagcgctcggaaggctggaggaacgtttatcc
gttcaatatgctcccttgcaaaaagaagccattcgacaagcgatttcttccccgttattt
attttgacgggtggtcctggcacaggaaaaacgacggtgattaaaggaatcgtagaaatt
ttcgctgatttgcacggtctttctctcgatccgaaagattacacgaaagatcacccattt
ccgattttgcttgccgcgccgacaggaagggcggcaaagagaatgagtgaagcaacggga
ttgcctgctgttacgattcatcgtttgcttggctggaatggcgcggaaggctttacacat
gatgaggatgagccgattcgcgggaagctcttaattgttgacgaaatgtccatggtcgat
acgtggctggccaatcagctatttaagtcgattccggacggcatgcaagtgattctcgtc
ggcgacgaagatcagctgccatccgttggacctggacaagtattaaaggatttattacaa
gcgggtgtcatcccgaccattcggctaacagaagtatatcggcaagcggaaggttcatcg
attattgaattggcgcaccaaatgaaaaatggtgtcatccccccggatttaacagcacaa
aaggcggatcgctcattcattcgctgtcagacagggcaaattgctgaagtcgtccggcaa
attgctgataatgcgcgaagaaaaggctttgcagtaaaagatattcaagtgcttgcgcca
atgtatcgcggtcctgccggaattgaccgccttaatcaagtgttgcaagatttgtttaat
ccaaaatcagagaaaaagcgggaactttctgtcggcgatgtagtgtatcgggttggcgat
aaggtgctgcagcttgtcaatcagcctgatgacaatgtatttaatggtgatatcggtgaa
attgtcgccattttttacgcaaaagaaaatacggaaaaacaagatttagtcgttgtttct
tttgatggcattgaggtaacgtattcgcggcaagatttgtcgcaaattacacatgcgtat
tgttgttccattcataaatcgcaaggaagcgaatttccaattgtcattttgccggttgta
aaaagctattatcgcatgttaaagagaaatttattatatactgcggtgacaagaagcaaa
cagtttttaattttatgtggggaagaagaagcgtttaagttaggcattgcccgcagtgat
gatggtgctcggcaaacaacgttaacggaaaagttgcaaagatctcttgcaccgattaca
gaaggagaactgccgatggaggatgcgaacatcggaatggaaaacgtttcaccgtatgat
tttatgaacgactag
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