Parageobacillus toebii NBRC 107807: DER53_16345
Help
Entry
DER53_16345 CDS
T06505
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
ptb
Parageobacillus toebii NBRC 107807
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
PAS_9
Sigma54_activ_2
PAS_4
HTH_8
PAS_8
AAA_2
AAA
AAA_5
Mg_chelatase
AAA_3
PAS_10
DapB_N
HTH_50
CoA_binding
Semialdhyde_dh
Glu_dehyd_C
GFO_IDH_MocA
PglD_N
NAD_binding_3
TrkA_N
Shikimate_DH
NAD_binding_7
AAA_16
Sacchrp_dh_NADP
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
QIQ34119
UniProt:
A0A6G9J7F3
LinkDB
All DBs
Position
complement(3178794..3180860)
Genome browser
AA seq
688 aa
AA seq
DB search
MKKVLIIGAGNGGTALLKLLEKTTMFQIVAVVDINEKACGIKLAKEMNIATGTDWRAFTS
EEIDLIIEATGKQEVLDEIRKHCSPNTIVVPGTVAHIMAELVEEKEMLIAKLKSETTRRG
LIFNSAHDGMIVVDEFAYITDINNSAAEMIEVDKEEVIGKHILEVIPTSGLPRVLKTKQT
EFHQELKLENGKKIITTRIPMIDETGKLFGALAVFKDITELVKLAEEITDLKEMRMMLEA
IIHSSEEAISVVDEHGNGILINPAYTRITGLTEEEVIGKPATADIAEGESMHMQVLKTRR
PVRGVRMKVGPKNRDVVVNVAPIIVDGVLKGSVGVIHDVSEIQRLTAELNRARQIIRTLE
AKYSFADIIGTSEGIKVAIEQAKVAAKTPVTILLRGESGTGKELFAHAIHNASDRKYNKF
IRVNCAAIPETLLESELFGYEEGAFSGAKRGGKRGLFEEANNGSIFLDEIGELSANTQAK
LLRVLQEGEIVRVGGTKPIPINVRVIAATNVNLEKAIAEGTFREDLYYRLNRMPIYIPPL
RARKEDIPALCQHLIQKLNQDYGRNVEGVTSAALDLLLAYDWPGNVRELENVLGRAMIFM
KFNEVMIDVHHIPPLDISRADSSPHKNEKETEIRPLEEMVEQYEASIIKQALRKYNNNKT
ATARALGISIRNLYYKLEKYNIDKNSMQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggtattgattattggagctggaaatggaggcacagcactattaaagctgctg
gaaaaaacaacaatgtttcaaattgtcgcagtagttgatatcaatgagaaagcttgcggt
ataaaacttgcgaaagaaatgaatattgctactggaaccgactggcgtgcttttacgagt
gaagaaattgaccttattattgaagcgacaggaaaacaggaagtgttggatgagatccgc
aaacattgttcgccgaatacgattgtcgtgccagggacagttgctcatataatggccgaa
cttgtcgaagaaaaagaaatgttgattgcgaaactgaaaagcgaaacaacaaggcgcggt
ttgatttttaattctgcgcatgacggaatgattgtcgttgacgagtttgcttatattacg
gatatcaataacagcgccgcggaaatgattgaagtggataaagaggaagtcatcggaaaa
cacattttagaagtcattccaacgagcggcctgccgcgagtgttaaaaacaaaacaaaca
gaatttcatcaagaattaaaattagaaaatggcaaaaaaatcattacaacgagaattcca
atgattgatgaaacgggtaaactgttcggtgcattagctgtttttaaagatattacggaa
ttagtaaagctagcagaggaaattaccgacttgaaagaaatgcgcatgatgttggaggcg
attattcattcttcagaggaagctatttccgttgttgatgagcatggaaacggcatttta
attaatcccgcttatacgcgcattaccggcctgacggaagaagaagtaatcggcaagccg
gcgaccgccgatatcgccgaaggggaaagcatgcatatgcaagtgctcaaaacgcgacgg
cccgtccgcggggtgcgcatgaaagtcgggccgaaaaaccgcgacgtggtcgtgaatgta
gcgccgattattgtcgatggagtgctgaaaggcagcgtcggggtgattcatgacgtatcc
gagatccagcggctgacagcggagcttaatcgggcaaggcaaattatccgtaccctcgaa
gcgaaatattcgtttgccgatattatcggtacgtcagagggaataaaggtagcaattgaa
caagcgaaagtagccgcaaaaacgccggtgacgatattgctgcgtggcgaatccggcaca
ggaaaggaattatttgctcacgcgattcataatgcaagtgatagaaaatataacaaattt
atccgtgtcaattgtgcggccattcctgaaacactattagagagcgagctgtttggttat
gaagaaggggcattttccggggcaaagcgcggcggcaaacgcggcttgtttgaagaagcg
aacaacggcagcatttttctggacgaaatcggtgagctttctgcgaatacgcaggcgaaa
ctgcttcgcgttttgcaagaaggggaaatcgtccgcgttggaggcacgaagccaatcccg
attaacgtccgtgtcattgccgccacgaatgtcaacttggaaaaagcaatcgcagaagga
acgtttcgtgaagacttatactaccggttaaatcgcatgccaatttatattcctccattg
cgggcgagaaaagaagatatacccgcactatgccagcatttaattcaaaaacttaatcaa
gactacggacgcaatgtcgaaggagtcacttcggccgcgcttgacctcctgcttgcttac
gattggccgggaaatgttcgcgaattggaaaatgtattaggccgggcgatgatttttatg
aagtttaatgaagtgatgatcgatgttcatcatattccgccccttgatatttcgcgagcc
gattcttctccccataaaaatgagaaggagacggaaatccgtccgcttgaggagatggtg
gagcaatatgaagcaagcatcatcaagcaggcgctgcgaaaatacaacaacaataaaacg
gcgacagcgcgggcgctgggcatttcgattcgcaatttatattacaagttggagaaatat
aatattgacaaaaatagcatgcaataa
DBGET
integrated database retrieval system
