Pseudoalteromonas tetraodonis: PTET_a2217
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Entry
PTET_a2217 CDS
T05282
Symbol
ldcC
Name
(GenBank) lysine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
ptd
Pseudoalteromonas tetraodonis
Pathway
ptd00330
Arginine and proline metabolism
ptd01100
Metabolic pathways
ptd01110
Biosynthesis of secondary metabolites
Module
ptd_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
ptd00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PTET_a2217 (ldcC)
Enzymes [BR:
ptd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
PTET_a2217 (ldcC)
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
Beta_elim_lyase
Cys_Met_Meta_PP
OKR_DC_1_N
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Pyridoxal_deC
Thioredoxin_16
Motif
Other DBs
NCBI-ProteinID:
ATD03571
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All DBs
Position
I:2133573..2135483
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AA seq
636 aa
AA seq
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MLPILRILLIEQDPVTLQELSTNLSKTIVNFERDDIHIDIIERLELKQALDIVEEDGDIQ
AVVLSWDLQNKVGERTYSRFIEQLKGIRLELPVYVIGDDTKGLEIVNESEEIESFFFKDE
VISDPEAILGYMINDFDDRSETPFWTAYRRYVGEANDSWHTPGHSGGSSFRNSPYIKDFY
QFYGRNVFVGDLSVSVDSLGSLSDSTNTIGRAQESAAATFEVKHTYFVTNGSSTSNKIIL
QTLLRKGDKVIIDRNCHKSVHYGILQSASLPVYLSSILNPKYGIFAPPSLADIKQAIEQN
TDAKLLVLTGCTYDGLLSDLKQVVDFAHQHGIKVFIDEAWFAYSLFHPSLRYYSAIHAGA
DYVTHSAHKVVSAFSQASYIHVNDPDFDADFFREIYSIYASTSPKYQLIASLDVCQKQLE
MEGYKLLNALLNHVEEFKQQMASLKQIKVLGKQDFMEIFPHFSGDNMGHDPLKILIDISE
LPYSLKDIHKYLLDEIGLEIEKYTHSTILVLLTLGGTRSKIIRLYNALKKLDSGKVKLSK
STRRSRLPENLPAIDLACIPSDAFYGERESVPIGKSNNRICAGLVTPYPPGIPLLVPGQH
ITEEHIEYLKELAGQGLTIQGSFDGEIYVLKGKVNK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgctaccaatacttcgtatcttgttaattgagcaagatccagtcaccttacaagagctt
tcaacgaatctgtcgaagaccattgtcaattttgagcgagatgatattcatatcgatatt
attgagcgtcttgagctaaaacaagcgttggacattgtagaggaagatggtgatattcag
gctgtagtgcttagctgggatttgcaaaataaggttggcgaacgcacttatagtcgcttt
atcgagcagttaaaagggatccgccttgagctgcctgtttatgttattggcgatgatacg
aaggggctagaaatcgttaatgagtcggaggagattgagtctttcttttttaaagatgag
gtaatttctgatcctgaagcaattttaggctatatgatcaacgatttcgatgaccgctca
gagaccccattttggactgcgtaccgccgctatgttggcgaagcaaacgattcttggcat
acaccaggtcacagtggcggctcgagctttagaaattctccttatattaaagatttttat
cagttttatggtcgtaatgtgtttgtgggcgatctgtcggtttctgttgattcgttagga
tcattatcagatagcactaataccattggccgtgcgcaagagtcagcagcggcgacgttt
gaagtcaagcatacctatttcgttaccaatgggtcgtctacctcaaataaaatcatcttg
cagacattgctgcgtaagggcgataaagtgatcatcgaccgcaattgtcataaatctgtg
cactatggcattttgcaatcagcgagtttacctgtttatttgtcgagtattttaaatcct
aaatatggcatttttgcgccgccgtcgttggccgatataaaacaagcgatagaacaaaat
accgatgcaaaattactggttcttaccggttgtacttacgatggcctactgagcgatctg
aaacaggtggtcgattttgcccatcaacatggtattaaagtatttattgacgaggcatgg
tttgcttactcgctgtttcatccaagcctacgatactattccgccattcatgctggcgct
gactacgtcactcattcggcgcataaagtggtatcggcgttttctcaagcatcttatatt
catgttaacgaccctgatttcgatgctgatttctttcgtgagatttacagtatttacgcc
agtacatcgccaaaatatcagcttatcgcgtcgcttgatgtgtgccaaaagcaattagag
atggaaggctataagttactcaatgctttgttgaaccatgtggaagaatttaaacaacag
atggcttcactcaaacaaattaaagtactaggtaagcaagactttatggaaatatttccg
cacttcagtggtgataacatgggtcacgatccgctaaaaattctcatcgacataagcgaa
ttaccttattcgttaaaggatattcataaatacctgctggatgaaattggcctagaaata
gaaaaatacacccacagtaccattttggtattactcacccttggtggcacgcgctcaaaa
ataattcgtctttacaatgcgctcaaaaaactcgacagcggtaaagtcaagttgtcaaag
tcgacgcgacgatctcgcttgcctgagaatctaccagccatagaccttgcgtgtattcca
agtgatgctttttatggcgagcgcgaatctgtgcctatcggtaaaagtaacaaccgtatt
tgtgccggtttagttaccccctatccgccaggtattccgcttttggtgcctggccagcat
attactgaggaacatatagagtaccttaaagagctagcaggacaaggtttgacgattcaa
gggagttttgatggtgaaatctatgttcttaagggcaaagttaataagtaa
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