Parasteatoda tepidariorum (common house spider): 107449658
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Entry
107449658 CDS
T06106
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptep03009
]
107449658
Enzymes [BR:
ptep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107449658
Ribosome biogenesis [BR:
ptep03009
]
Eukaryotic type
Pre-60S particles
Helicases
107449658
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Motif
Other DBs
NCBI-GeneID:
107449658
NCBI-ProteinID:
XP_015920743
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MEEESCNFRDFGLDERLLSAINTLNWKEPTLIQEKAIPLALEGKDILARARTGSGKTGAF
LIPILQQLLQRKRSNYVQETTVLIIAPSKELCKQINNNINELTKFCFQDITSFDVSPQVD
LSTQRPLLRDKPDIVIGTPMRILAHLQENNLRLENSLRTLVIDEADLLFSFGCKSDVLKI
LNSTQKSYLPPIYQVFLMSATLSQDLGTLKKLIRLHNPVVLKLKEPELPERDRLTQYHIK
CEEEDKFVLMYALLKLNLIQGKSLIFVKSVDRCYQLKLYLEQFGIKSCILNCELPASCRV
HVVNQFNMGIYDIIIASDERVADAPSSTPAKKKFKKDKEYGVSRGIDFQFVSNVINFDFP
YSVEAYVHRVGRTARGNADGAALSFVSLKEMPHLKQVEDYFSDGTEDAKFEFKPYLFKME
ELEGFRYRARDAFRAVTSIAVREARLKEIKSELLNSKNLKSYFDDNPRDLQILRHDKALH
TVKLHSHLKDIPDYIVPPTLKNAVPMEGSKGKRSKGSGGHVKKEGKARKKFKKSQKDPLK
SFQFAGLTELESKKKKKKRAKN
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaatcgtgtaactttcgagattttgggcttgatgaacgtctgctatcagct
attaacactcttaactggaaagaaccaacattaattcaagagaaagctatacctttggca
ttagaaggtaaagatattcttgcacgagctagaactggttcaggcaaaacaggtgctttt
cttattccaattcttcaacaattattgcaaaggaagcgatctaattatgtacaagaaaca
actgttcttataattgcccctagcaaggagttgtgtaagcaaatcaacaacaatattaac
gaactgactaaattttgtttccaagatatcacgagcttcgacgtttctcctcaagttgat
ctttctacgcaacggcctttattacgcgataaaccggatatagttattggaacacctatg
cgaattcttgcacatctacaggaaaacaacttacgccttgaaaattctttacgtactcta
gttattgatgaagcggatttgcttttttcatttggttgtaaaagtgatgttttgaagatt
ttaaattcaactcaaaagtcgtaccttccacctatttatcaggtgtttttaatgtcagcc
actctgtctcaagatttaggaactttgaagaagttaattcgccttcacaatcctgttgtt
ctaaagctgaaagaaccggaactcccagaaagagacaggcttacccagtaccatataaaa
tgtgaagaggaagacaaatttgtgttaatgtatgccttgttaaaattaaatttgatacaa
ggcaaatcgttaatttttgtcaagtctgttgacagatgttatcagttgaagttatatctg
gaacaatttggtatcaaaagttgtattctcaattgtgaacttcctgcttcgtgtcgtgtt
catgttgttaatcagttcaatatgggaatttatgatataataattgcttctgatgagcgt
gtcgccgatgcgccgagcagcacgcctgccaagaagaaatttaaaaaagataaagagtat
ggcgtctctcgtggaattgactttcagtttgtttctaatgttattaatttcgattttcct
tattcagttgaagcttatgtgcatagggttgggcgtactgctcgaggaaatgcagatggc
gctgcgttatcatttgtcagtcttaaagaaatgccgcatcttaaacaagtcgaagattat
ttctcagacgggactgaagatgcaaaatttgaattcaaaccatatctttttaaaatggaa
gagttggaaggatttcggtatagggcacgagatgcctttagagctgtaacatcgattgct
gttcgagaagcacgattgaaagaaattaaatcagaacttttaaattctaaaaatttaaaa
tcttactttgacgacaatccaagagatcttcagattttgagacatgataaagctttgcac
actgttaagttacattcacatttgaaagatatacctgactatattgttcctcctacttta
aaaaatgctgtccctatggaaggtagtaaaggaaaacgttctaaaggatcaggtggtcat
gtgaaaaaagaaggtaaagctagaaagaagttcaagaaaagtcagaaagatcctttaaaa
agctttcaatttgctggattgactgaattagaaagtaaaaagaaaaagaagaaaagagcc
aaaaactaa
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