Puntigrus tetrazona (Sumatra barb): 122341987
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Entry
122341987 CDS
T08985
Symbol
recql5
Name
(RefSeq) ATP-dependent DNA helicase Q5 isoform X1
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122341987 (recql5)
Enzymes [BR:
ptet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
122341987 (recql5)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
122341987 (recql5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RecQ5
ResIII
TFIIS_M
EloA-BP1
KIX_2
SRI
Motif
Other DBs
NCBI-GeneID:
122341987
NCBI-ProteinID:
XP_043091685
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Position
3:26990895..27007803
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AA seq
958 aa
AA seq
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MSAVQRALKKHFGFDSFRSRQQEDAVKAVLKGDRDVFVLMPTGAGKSLCYQLPALLASGI
TLVISPLIALIQDQVEHLKALNVPARSINSKLPSAERRQILADLESESPRLKLLYITPEM
VASPSFQPCLSSLRERGLLAYLAVDEAHCVSQWGHDFRPDYLKLGALRSRLRGVPCVALT
ATAPRRVQEDIERSLELRSPLVFATPVFRENLKYDVMFRDLLPDPYAHLLAFAKEALGGN
TAEKGCGIVYCRTRESCEEVAHKLTKLGIAAKPYHAGLKAADRTESQTDWMADKVPVIVA
TVSFGMGVDKANVRFVVHWNLAKSLASYYQESGRAGRDGLPSSCRIYYSPKDRDQLNFLI
RKEIARKQEKRGSEKEQDKAPILDFEAMVAFCEQEGCRHATISQFFGNQKPDCAGACDFC
RDPSLVRAQLARAAALSTRTGPAQSAGPRGPFGFDPELYAGGRKGYGFERYDEEWGNEED
DSEKRKKEFGDLFKKQMSMRRSSDVAKETFAPPDADCMLKDASSQRIPRLTVKSREHCLS
LLQERLSNHRGAAELSHSSDTLDQAVEIEHEIFRASKSANLYKAAVLKRVSEMKKSAAEE
KRPDPNEETASCSSSSQPLDGFTSASQVYSLKRKRIGAGFRGSSGLFQTAGDLLKNSQKE
TPATDKTPGDPICEEEQEEETERTRKRKSGDSSPIKAKSSPSKRLTKKQQKLAEAAKDTR
RISQYFGKKQVDTAQTKAGSVTSEPEEEVPQNHSSLLNNTDLITKNSAATEAEGVSEKVT
AALLHTSASAEGTPVRDEMPINTERTEGQALRGENHEPDTQQISPKQSREDGSPPPPAKR
SRVMKDTKRVTFDPVVQETQFDAVNGDAAEISPKPVTLKEAADIVVRCLDPFYKKGKFAT
KDLFKSFARFLSHLLTEGKTANRGQVKTEAKSLIKGFFSRIQRCESETDWRHLKVEDR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgttcagcgggcgttaaagaaacacttcggattcgacagctttcgatctcga
cagcaggaagatgcggtgaaagcagtgctgaagggggacagggatgtgttcgtcctcatg
cccactggagcagggaagtctctgtgctatcagctgcccgctcttctggccagcggcatt
actctggtcatctctcctctgatcgccctcatccaggatcaagtggagcacctgaaagct
ctgaatgttcccgcgcgctccatcaactccaagctcccctcggctgagcggcggcagatc
ctggcggacctggagagcgagagcccccggctcaagctgctctacatcactccggagatg
gtggcgtccccgtccttccagccctgcctgagctccctgcgcgagcggggcctgctggcg
tacctggccgtggacgaggctcactgcgtctctcagtggggacacgacttcaggccggac
tacctgaagctcggggccctgcgctcccgtctgcggggggtcccctgcgtggcgctgacg
gccacggctcccaggagagtgcaggaagacatcgagcgctcgctggagctgcgctcgccg
ctcgtcttcgccacgcccgttttccgcgaaaacttgaaatacgacgtgatgttccgggat
ctgcttcctgacccttacgcgcacttgctcgcgttcgccaaagaggctctgggtggaaat
acagcggaaaagggctgtgggatcgtttactgtcgcaccagagagagttgtgaggaagtg
gctcataagctgactaaactgggaatcgcagccaagccctatcacgcagggctgaaggcg
gccgaccgcaccgagagtcagactgactggatggccgataaagtgcctgttattgtggcc
accgtcagttttggtatgggagtggacaaggccaacgtcaggtttgtcgttcactggaac
ctggcgaagtctttggccagttactatcaggagtcgggccgagccggacgggatggactg
ccgtcgtcctgcaggatatactactctcccaaagacagagaccagctcaacttcctcatc
cgcaaagagatcgcccgcaaacaggagaagcgcggatcagagaaagagcaggacaaggcg
cccatcctggacttcgaggcgatggttgctttttgtgaacaagaagggtgcagacacgcc
accatctcacagttttttggcaaccagaagcccgactgcgccggagcgtgtgacttctgc
cgtgaccccagcctggtgcgcgcccagctggcgagagcagccgccctcagcaccagaacc
ggcccggcacagagcgcggggcccagggggcccttcggctttgacccggaactctacgcc
ggaggcaggaagggttacggctttgagaggtatgatgaggaatggggcaatgaggaagat
gactcggagaagaggaagaaagaattcggagatctcttcaagaaacagatgagcatgaga
aggagttcggacgtggctaaagagacgtttgctccaccagacgccgactgcatgttgaag
gatgccagcagtcagagaatccccaggctcacggtgaagagcagagagcactgtctgtct
ctcctgcaggagcgcctgagcaaccacaggggggcagccgagctctcacacagctcggac
actcttgatcaggctgtagaaatagagcacgagatcttcagagccagtaaatcagcaaac
ctgtacaaggccgcagtcctcaagagagtgtcagagatgaagaaaagtgcagctgaagag
aaacggcctgacccgaatgaagagacggcaagctgctcttcatcatctcaacctctagac
ggcttcacttcagcctctcaagtctactcactgaagaggaagcgcataggagcgggattt
cgcggctcgtccggcctgtttcagacagctggagatcttctgaagaactctcagaaggag
acgcctgccacggacaaaacacctggagaccccatctgtgaggaagagcaggaggaggaa
acggaaagaacacggaagaggaaaagcggcgactcatctcccatcaaagccaaaagcagc
cccagtaaaagactcactaagaaacagcagaagctggcagaagcggccaaagacacgcgt
cgcatctcgcagtatttcggaaaaaagcaagtggacaccgctcagacgaaagcaggaagc
gttacgtcagagcccgaggaagaagtccctcagaatcactcgtctttgctaaataacaca
gacttgataacgaagaacagcgcagctacggaggcagaaggcgtctcggagaaagtcacc
gccgctcttctgcacacgagtgcgtctgcagaagggacgcccgtccgagacgagatgccc
atcaacactgaaaggacggaaggccaagcgcttcggggagagaaccacgaacctgacacc
caacaaatatcaccaaaacaatcacgtgaggacggatccccaccgcctcctgcgaagcgc
agccgcgtgatgaaggacactaagagagtgacctttgacccggtggtgcaggagacgcag
tttgacgccgtgaacggagacgccgctgaaatctcgccaaagcctgtgacgctgaaggaa
gctgctgatatcgtggtgcgatgcctggatcccttctacaaaaagggcaaatttgcaaca
aaggatttgttcaaatcctttgcccgtttcctctcccatcttctcacggagggaaaaact
gcaaatcgaggccaagtgaagacggaagcgaagagcctcatcaagggcttcttcagcagg
attcagcgctgcgagagcgagacggactggagacacttgaaagtggaggacagatag
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