Panthera tigris altaica (Amur tiger): 102958263
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Entry
102958263 CDS
T02988
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03440
Homologous recombination
ptg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102958263 (PALB2)
03460 Fanconi anemia pathway
102958263 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptg03400
]
102958263 (PALB2)
DNA repair and recombination proteins [BR:
ptg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
102958263 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
102958263 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
102958263
NCBI-ProteinID:
XP_007084156
LinkDB
All DBs
Position
Un
AA seq
1131 aa
AA seq
DB search
MEEPPGKPLSYEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKVKNSVKKAAEEHDCLFQ
QDISPQLNHSESKNKVSPCETLQISTHLDEETGEKTPITLDIEPESFNLGHGPVERLHIQ
SDIQEHFPYQVSGPSGEKRQSKLPKRRKQQQRTFTSQARESFFDTDSLILSGKRLKELEE
NRENPRTPVTGRTYLSNSTCDILDSPAPVTETNVRGVLTPPTTKPQRVVDALVRGNHFPT
VSTLASFTPSNNSSGQHLEHKPPKGDCELITHGLKNIIPASPVNLEAQDQKMTVSTDSPE
VNKAVSASGQLPRSPDLETDNLCSVNEFAYNNLSANGNQNLKGQNHTEECLKSPHNTLDD
RNESPQEKEVVSQSKSLSPEVISPASAENQTHSCTMLEGLPFPAEYYVRTTRSMSSYQRK
VALEVVIQNHLGVTKKGYKNKSKEATKNLNLPSEETDQSGIRTSDTCTRQPNSGSPQKRP
SSTEVNSPLGPPKDNLSRKAVIQPSGRRHGRKTKSICTPVLDDGELLLPTFGTSGVNRSK
EEVALNKEQNGKAIIHDFQLPDEDFGPLKLKKLKSQSEKSVEPFVSKMYGDKLLKEGNCV
ILEEMTPTQIDIEMEDLEEEILVLPGKAQPKTPNPTSQPQKKGLSSSIVLFTPFNTVTPE
DNDRLMADVCSPAFPILGTTPAFGSQARCERGSTGGVGSNLVGSTCSVPQLPHLKDCDRK
QGDSWASPSKSDGSPVVSGREGQPSCGNDSGSQAKLLPTESVTSEENQLCGNLHVESWKQ
STEQTEVGDLPACNGLIPGHLQLVSKLKNPSGSCSVDVSAMWWEIAGFKEPCIITACEYV
VSLWKPLDTWQWEKLYSWHFTEVPVLQIVPVPDVCNLVCVALGNLEIREIRSLLCSSDGG
CEKQVLLSSGNIKAVLGLTERRLVSSSGTLCDQRVEIMTFAEDGRSKEKQFLMSPEETVL
TFAEVQGVQEALLGTTVMNNIVIWNLKTGQLLKKMHIGDSYQASVCHKAYSEMGLLFVVL
SHPCAKESEPLGSPVFQLIVINPKTTLSVGVMLYCLPQGQAGRFLEGDVKDHFAAAVLTS
GTIAIWDLLLGHCTALLPPISDQHWSFVKWSGTHSHLLAGQKDGNIFVYRN
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcctcccgggaaacctctcagctatgaggaaaaggaaaagttgaaggaaaag
ttagcattcttgaaaagggaatacagcaagacgctggcccgcctccagcgtgcccaaaga
gctgagaaggttaagaattctgttaagaaagcagcagaagaacatgattgcttgttccag
caggacatttcaccacagctaaaccactcagaatctaaaaataaagtatctccttgtgag
acattacaaatcagcacccatctggatgaagaaactggagaaaagacacctatcacactt
gacattgagcctgagtccttcaaccttggacatggccccgtggaaagattacatatacaa
agtgatatccaagaacattttccctaccaggtcagtggtcctagtggtgagaaaaggcag
agtaagttgccaaagagaagaaagcagcagcagagaacatttacttcacaggcgagagaa
tctttctttgacacggattcactcatactctctggaaaaagactaaaggaactggaagaa
aatagagagaatcctagaacacctgtaactggaagaacttacctttcaaattctacgtgt
gacattctggattctccagcaccagtgacagaaactaacgtaaggggtgtattaactcca
ccaactaccaaaccacaaagagttgttgatgcactcgtaagaggaaatcatttccccaca
gtgtctacacttgcttcatttactccatcaaataacagtagtggtcagcaccttgaacat
aagcctcctaaaggcgactgtgaactcattactcatggtttaaaaaacattatccctgct
tcacctgtaaacctggaggcacaagaccaaaaaatgactgtctctacagatagcccagag
gtaaataaagctgtaagtgcaagtggccagctgcctagaagtcctgacttagagacagat
aatttgtgctctgtgaatgaattcgcttacaataacttatcagcaaatggaaaccaaaat
ttaaaaggacagaatcacacagaggagtgtttaaaatctccccataacactcttgatgat
agaaatgaaagtcctcaggaaaaagaggttgtaagtcaatctaagagtcttagcccagaa
gtaatctctcctgcttctgcagaaaatcaaacacattcttgcacaatgctcgaaggcctt
ccatttcccgcagaatattatgttagaacaacacgaagcatgtcaagttaccagagaaaa
gtagccctggaagttgtaattcaaaatcatttgggtgtcacaaagaaagggtataaaaat
aaaagtaaggaggcaactaaaaatttaaaccttcccagtgaagaaactgaccagagtgga
attaggacctctgacacatgcacaagacaaccaaactcaggaagtcctcagaaacgtccc
tcttcaactgaagtcaactctccccttgggccccctaaagataacctttccaggaaggca
gttatccagccatctggtaggagacacggaagaaaaacaaagtcaatctgcacccctgta
ttagatgatggtgaactccttttgccaacttttggcacatcaggtgttaatagatccaag
gaagaagttgccttgaacaaagagcagaatggaaaggcaattattcatgattttcagtta
cctgatgaagactttggacctcttaagcttaagaaactgaagtcccaatcagaaaaatca
gtggagccttttgtatcaaaaatgtatggggataagctccttaaggagggaaactgtgtt
attttggaagaaatgacacctacacaaattgatattgaaatggaggacttggaagaggaa
attcttgttctcccaggaaaagcacaacctaaaacaccaaacccaacaagccagcctcag
aagaagggcctttcttcatccatagtacttttcactcctttcaataccgtcacccctgag
gataatgacagactgatggcagatgtgtgttcgcccgccttccccatcctaggcactact
ccagctttcggctcccaagcacgctgtgaaagagggtccaccgggggggttggatcaaac
ttggttggatcaacttgctctgtaccccagcttcctcacttgaaagactgtgatcggaag
caaggcgacagttgggccagcccctcaaaatcagatggcagcccggttgtgtcaggtcgg
gaaggacagccttcctgtggcaatgattctggttcccaagcaaaacttcttcccactgag
tcagtcacttccgaagaaaatcagctgtgtggaaatctgcacgtggagtcatggaaacag
tccactgagcagactgaagtaggagaccttcctgcttgtaatggcttaatcccaggccac
ctacaattggtttcgaagttaaagaatccttctggttcctgttccgtggacgtgagtgcc
atgtggtgggaaatagccggtttcaaagagccatgtatcataactgcctgtgaatacgta
gtttctctttggaaacctctagatacttggcagtgggaaaaactttattcctggcacttt
acagaggttccagtgttacagatagttccagtgcctgatgtttgtaacctcgtgtgcgtg
gctttgggaaatttggaaatcagggaaatcaggtcattactttgttcctctgatggtgga
tgtgaaaagcaagtgctactgagttctggaaatataaaagctgtgcttggcctgacagag
aggaggctagtcagtagcagtgggaccctttgtgaccaacgagtagaaatcatgacattt
gcagaagacggaagaagcaaagaaaaacaatttttgatgtcccctgaagagactgtacta
acttttgctgaggtgcaaggggtgcaggaagctctgcttgggaccactgtaatgaacaac
attgttatttggaatttaaaaactggtcagctcctgaaaaagatgcacattggtgattcc
taccaagcttcagtctgtcacaaagcctattctgaaatggggctcctgtttgttgtcctg
agccatccttgtgccaaagagagtgagccgttgggaagcccggtgtttcagctgattgtg
attaaccctaagacaaccctgagtgtgggtgtgatgctctactgtcttccccaagggcag
gctggaaggttcctggaaggtgatgtgaaagatcattttgcagcggcagtattgacttct
ggaacaattgccatctgggacttacttctgggtcattgtactgccctcctcccacctatc
tctgaccaacattggtctttcgttaaatggtcaggtacacattctcatttgttggccgga
caaaaagatggaaatatatttgtataccgcaactaa
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