Pelotomaculum thermopropionicum: PTH_0121
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Entry
PTH_0121 CDS
T00519
Symbol
HimA
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pth
Pelotomaculum thermopropionicum
Brite
KEGG Orthology (KO) [BR:
pth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pth03032
]
PTH_0121 (HimA)
03036 Chromosome and associated proteins [BR:
pth03036
]
PTH_0121 (HimA)
03400 DNA repair and recombination proteins [BR:
pth03400
]
PTH_0121 (HimA)
DNA replication proteins [BR:
pth03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PTH_0121 (HimA)
Chromosome and associated proteins [BR:
pth03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PTH_0121 (HimA)
DNA repair and recombination proteins [BR:
pth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PTH_0121 (HimA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
BAF58302
UniProt:
A5D641
LinkDB
All DBs
Position
116343..116618
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AA seq
91 aa
AA seq
DB search
MNKAELISNVAEKTELTKKDAEKAISAFLDTVGEALARGDKVQLVGFGTFEIRERAARKG
RNPQTGEEINIAAARVPVFKAGKALRDAVLK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggctgaattgatttcgaatgttgccgagaaaacggaattaaccaaaaaagat
gccgaaaaagccatcagcgcgttcttggacaccgttggggaagccctggcaaggggcgac
aaggttcagttggtcggcttcggaacatttgaaatcagggagagggcagcccgcaagggg
agaaatccgcagaccggcgaggaaatcaatatagccgccgcccgggtgcctgtctttaag
gcggggaaagcgctcagggacgcggtgttaaaataa
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