Phaeodactylum tricornutum: PHATRDRAFT_522
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Entry
PHATRDRAFT_522 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K03252
translation initiation factor 3 subunit C
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pti03012
]
PHATRDRAFT_522
Translation factors [BR:
pti03012
]
Eukaryotic type
Initiation factors
eIF-3
PHATRDRAFT_522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
Herpes_UL69
Motif
Other DBs
NCBI-GeneID:
7194820
NCBI-ProteinID:
XP_002183081
JGI:
522
UniProt:
B7G7V4
LinkDB
All DBs
Position
18:358657..361619
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AA seq
743 aa
AA seq
DB search
DEVRVVKSGKERALETFQKHIKNLRGAMKARDYYLIQTEFDELTKAMIKAKQYLAEGVPR
PLVRILVDLEDYAVERLKDKEQFKKLSARQGRALNRMKLTYKKHNKAYEVVMHAYRKNPI
VSDDDEKSEPESDSAASSGSSSSSSSSSKNLTPAVLLRKVNEIASQRGRRGRDSRQLLRQ
LEALSRLSLKFGPRIEIPILMHVISAQFGLQRTLDDTMETATWKSCASYLQRIADVVDDG
YKLVVESVDESDMSKLTDEEKKRISVVGSLPLHLTRLEEEYTKSLQRTSQHSSEYIVRLR
DESKLVELLTRFQRYFEAEGMVTDAAALSMLHMEHIYYRHDSIAKQVDKAAIFYEIFGEA
VMLHPACITADEAGKEKGDFEAFHPGAFQGKPNLEDTDDVNFTEVMSRLSSFVYKHGTDQ
AKTRAVICQIYHLALHDHFLDARDLLLMSHLQETIYNVGDVSTMVMFNRMMVTLGMCAFR
LGRISDAHQCLSEICSNRVRELLAQGVNTGRFSDKTAEQEKAEKRRQIPYHQHINMDLLE
ACHLISAMLLEVPNMAQMAIDGDNGTRRNRVISRSFRKFHDQYNHQVFTGPPEQTRDFVM
RASMALKKGDWKTCSDLTTNLDVWQLVPGEGVAEQIGQMLTEKIKLEALRTYLFSFSAQY
DSLSLSQLCGMFEMSKSEVHSVVSKMIINRELYASWDQPTETIVLRKVEPTSLQVMALQF
AEKASGLVEANERLLDSQSGAYG
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
gatgaagtacgcgtcgtaaaatcgggaaaggaacgtgcgttggaaaccttccaaaagcac
atcaagaacttgcgtggcgcaatgaaagcacgtgattactacctgattcagactgaattt
gatgagctcaccaaggcgatgatcaaggctaagcaatacttggcggaaggcgttccacgt
ccccttgtgcgtattctggtggacttggaagattacgctgtggagcgactcaaggacaag
gaacagtttaagaagcttagtgcccgacagggtcgtgccttgaaccggatgaaactgaca
tacaagaagcacaacaaggcgtacgaggtcgtgatgcatgcttaccgtaagaatcctatc
gtgagtgacgatgatgaaaagagcgaaccggagagcgatagtgctgcttcttctggaagc
tcgtcgagttcaagctctagtagcaaaaatttgactccggctgtgctcctacgcaaggtc
aatgagattgcttcccaacgaggacgccgaggtcgagatagtcgtcagcttttgcggcaa
ttggaagcgctctcgaggctgtcactcaagtttggaccacgtatcgaaattcccattcta
atgcacgtgatctcagcgcagtttggattgcagcgcacactcgatgatacgatggagaca
gcgacgtggaaatcatgtgcgtcgtacttgcagcgtattgcggacgttgtggacgatggt
tacaaactagttgttgaaagcgtcgacgagagtgacatgtctaagttgaccgacgaagag
aaaaaacgcatttcggtcgtgggttccttgcctctccaccttacccgcctcgaggaagaa
tacacgaaaagcttacagcgcacttcgcaacattcgtctgaatatattgtacgcctgcgc
gatgaatccaaactagtcgagcttttgacgcgcttccagaggtactttgaggccgagggc
atggtaaccgatgcagccgcgttgtcaatgttgcacatggaacatatatactaccgtcat
gactcgattgcaaagcaagtagacaaggctgccatattctatgaaatattcggtgaggcc
gttatgcttcaccctgcatgtattaccgcagacgaagctggtaaggaaaaaggcgacttt
gaggctttccatcccggtgcgttccaagggaagccaaacctcgaagatactgacgatgtc
aacttcaccgaggtcatgtccaggctttccagttttgtgtacaagcatggcactgatcag
gccaagacccgtgctgtgatttgtcaaatatatcaccttgcgttgcacgatcatttttta
gatgctcgcgatttgctgctgatgtcacacttgcaggaaactatttacaatgtaggagat
gtctccacaatggttatgtttaatcgcatgatggtgacactcggtatgtgtgcattccgt
ttggggcgtatcagtgatgcccatcagtgcttgtctgagatctgctcgaaccgtgttcgc
gaattgcttgcccagggagtgaacactggtcggttcagcgacaagactgcagagcaagaa
aaagccgaaaagcgccggcagattccctatcatcaacatattaacatggacctccttgaa
gcttgccatctgatcagcgcaatgctgttggaagttcccaacatggcacaaatggcaatc
gatggcgacaatggtactcgccggaaccgtgtcatctcccgatcgtttcgcaagtttcat
gaccagtacaaccatcaagttttcaccggtcctccagaacagactcgcgactttgtcatg
agggcatccatggctttgaagaaaggcgactggaagacatgttctgatttgacaacgaac
cttgatgtctggcagctggttccaggtgaaggagtggccgaacaaattgggcaaatgctt
acggaaaaaatcaagctggaggcactacggacttatttattctccttttcagcccagtat
gattccttgtcgcttagccagctttgcggtatgttcgaaatgagcaagagcgaagtccat
tcggttgtctccaagatgattatcaatcgcgagctatacgctagctgggatcaaccaacg
gaaacgattgtcttgcgaaaggttgagcctacctctttacaagtgatggccttgcaattt
gcagaaaaagcttccggtcttgtcgaggccaacgagcgtcttctggactcgcaaagtgga
gcctacgga
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