Paenibacillus tianjinensis: JRJ22_04265
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Entry
JRJ22_04265 CDS
T07842
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
ptj
Paenibacillus tianjinensis
Pathway
ptj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ptj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
JRJ22_04265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptj03400
]
JRJ22_04265
DNA repair and recombination proteins [BR:
ptj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
JRJ22_04265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
ZnF_RZ-type
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
QSF45856
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All DBs
Position
complement(1002886..1003857)
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AA seq
323 aa
AA seq
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MHTVWKGAISFGLVHVPVKMFSATEDKDISLRYIHKECGSPLSYVRKCPVCEKEVGWEEI
GKGYEYEKGKFVLFDKEELDQLTEESSKSITILDFVDLTEIDPIYFQKTYYLSPDQAGTN
AYRLLMEAMRQTGKIGIAKISIRSKSSLAAIRVLEDCLAIETIFYPDEVRPVSQVPGLPE
AGMVSDKELDMAKLLISQLSTPFEPEKYTDDYRQRMLDLISHKVSGEEFHIAPSQQESNV
IDLMAALQASIEAVQHIPADPGPSLAGSASKPKTAAGTKKKTAKAKTAEAAPGTAVVNEV
TGPIPVIAPKAKRRSPKSKETVS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcataccgtttggaaaggagccatcagcttcggacttgtgcatgtaccggtcaaaatg
ttctccgccacggaggataaggacatctcactgcgctacatccacaaagaatgcggcagt
ccgctgtcctatgtacgcaaatgcccggtttgtgagaaggaagtgggctgggaggaaatc
ggcaagggctatgagtacgaaaaaggaaagtttgtcctgtttgacaaagaggaactggac
cagctgaccgaggaaagcagcaaaagtattacgatccttgattttgtggatttgacggag
atcgacccgatttattttcaaaaaacctactatctgtctccggaccaggcgggcaccaat
gcttaccggctgctgatggaggcaatgcgccagacaggtaagatcgggattgccaagatt
tccatccgctccaaaagcagcctggccgccatccgtgtgctggaggactgcctggcgatt
gagaccatcttttatcccgatgaggtgcggccggtctcccaggttcccggattgccggaa
gcgggaatggtgagcgataaagagctggatatggccaagctgctgatctctcagctgtcc
acaccgtttgagccggagaaatatacggacgactaccgtcagcggatgctggacttgatc
tcccacaaagtctccggggaggaattccatatcgcaccgtcgcagcaggagagcaatgtt
atcgatctgatggctgcactgcaggccagtatcgaagctgtccagcacatcccggccgat
cctggcccttctctggccggctcagccagcaagccaaaaacggcagccggtacaaagaaa
aaaacagccaaagccaaaacagctgaagcggcgccgggaactgccgtagttaacgaagta
accggaccgattccggtcatagctcccaaagcgaagcggcgcagccctaaaagcaaagag
accgtttcctaa
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