Paenibacillus tianjinensis: JRJ22_26315
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Entry
JRJ22_26315 CDS
T07842
Symbol
sigH
Name
(GenBank) RNA polymerase sporulation sigma factor SigH
KO
K27000
RNA polymerase sigma-H factor
Organism
ptj
Paenibacillus tianjinensis
Brite
KEGG Orthology (KO) [BR:
ptj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptj03021
]
JRJ22_26315 (sigH)
Transcription machinery [BR:
ptj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JRJ22_26315 (sigH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_23
HTH_38
HTH_16
Sigma70_ECF
Sigma70_r4
HTH_30
HTH_28
HTH_36
UPF0122
HTH_29
Terminase_5
ACDC
Motif
Other DBs
NCBI-ProteinID:
QSF44635
LinkDB
All DBs
Position
complement(5638665..5639309)
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AA seq
214 aa
AA seq
DB search
MSVDLKEIMLSEYDFISDEEIVEIFRGGDSGALEHLINKYRNFVRAKARSYFLIGADRED
IVQEGMIGLYKAIRDFKGDKLSSFKAFAELCITRQIITAIKTATRQKHIPLNSYVSLDKP
IYDEDSDRTLMDVICGTQVLDPEELIINQEEFIGLEDKMAEILSDLERKVLMLYLDGRSY
QEIAEDLKRHVKSIDNALQRVKRKLERYLEVRDN
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgtcgacctcaaggaaataatgctttccgagtatgatttcataagtgatgaagaa
attgtcgagatcttccgtggtggcgacagtggcgcattggaacatttaattaacaagtac
cgtaattttgtacgcgctaaggcacgttcttattttctgattggagcggaccgggaagat
atcgtacaggaaggcatgattggcctgtataaggcgattcgtgacttcaaaggtgacaag
ctctcttccttcaaagcgtttgctgagctctgcattacccgtcagattataactgctatc
aagactgctacccgtcagaagcatattccgcttaattcttatgtatctttggacaagcct
atctatgatgaggactcagaccggacactgatggatgtgatctgcggtacacaggtgctg
gatcccgaagaactgattatcaaccaggaagaatttatcggactggaagataagatggcg
gagattcttagcgacctagaacgcaaagttctgatgctctacctggatggaagatcctat
caggagattgcagaagacttgaagcggcatgtgaaatcgattgataatgcattgcagcgg
gttaaacgcaaattggaaagatatctggaagtgcgtgacaattaa
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