Parageobacillus thermoglucosidasius DSM 2542: AOT13_09035
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Entry
AOT13_09035 CDS
T04476
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ptl
Parageobacillus thermoglucosidasius DSM 2542
Brite
KEGG Orthology (KO) [BR:
ptl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptl03032
]
AOT13_09035
03400 DNA repair and recombination proteins [BR:
ptl03400
]
AOT13_09035
Enzymes [BR:
ptl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AOT13_09035
DNA replication proteins [BR:
ptl03032
]
Prokaryotic type
DNA Topoisomerases
AOT13_09035
DNA repair and recombination proteins [BR:
ptl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AOT13_09035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
RNA_POL_M_15KD
Toprim_4
Toprim_2
zf_Rg
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ALF10142
LinkDB
All DBs
Position
1812842..1814917
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDINNGYEPKYITIRGK
GQIIKELKTAAKKAKKVFLAADPDREGEAIAWHLANMLELDIHSDCRVVFNEITKDAIKE
SFQHPRAIDMNLVDAQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVALRLIIDREK
EIKQFQPEEYWTIQAEFVKGNETFTASFYGADGQKLDLKNEADVSAILRRINGNHFTVTS
VAKKERKRNPVPPFTTSSLQQEAARKLNFRTKKTMMIAQQLYEGIDLGSEGTVGLITYMR
TDSTRVSESAQQEALSYIEATFGKEFAAQEKRKEKKSANAQDAHEAIRPTSVFRDPEKVK
PYLTRDQFRLYKLIWERFVASQMAAALLDTMSVELENGGVIFRANGSKVKFPGFMKVYVE
GTDDQTDEQDRLLPDLQEGETVFSKDIEPKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTIDTIQKRNYVVLENKRFVPTELGEIVVELILEFFPEIIDVEFTAKMEKNLDEIEEGK
VQWVKVVDEFYREFEKRLQIAEKEMKEVEIKDEPAGVDCEVCGSPMVYKMGRFGKFVACS
NFPECRNTKPIVKEIGVKCPKCHEGNIVERSSKKKRIFYGCDRFPQCDFVSWDKPLARRC
PKCEGMLVEKKLKKGVQVQCTSCDYEEEPQS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactatcttgtcatcgtggaatcgccggcgaaagcgaaaacaattgaacgatat
ttaggaaaaaaatataaagtgaaagcttcgatgggacacgttcgcgatctgccaaaaagc
cagatgggcgttgatataaataacggttatgaaccaaagtatatcacgattcgcggaaaa
ggacagattattaaagagctgaaaacagcagcgaaaaaagcaaaaaaagtgtttcttgcc
gcagacccggaccgagaaggggaagcgattgcttggcatttagccaatatgcttgaactt
gacattcattccgattgccgcgttgtctttaacgagattacgaaagacgcgattaaggag
tcatttcagcatccgcgggcgatcgatatgaatttggtagacgcacagcaagcgcgccgc
gtgttggaccggctcgtcggttacaacattagcccgctgctttggaaaaaggtgaagaag
ggcttgagcgcggggcgcgtccagtccgtagcgctgcgtttgatcattgatcgcgaaaaa
gagattaaacaatttcagccggaagaatattggacgattcaagcggaatttgtgaaagga
aacgaaacgtttaccgcttctttctatggagccgacgggcaaaagcttgacttaaaaaac
gaagcggacgtttccgcgattttgcggcgcattaacggcaatcactttacggtgacatcg
gtggcaaaaaaggaacggaaacgaaacccggtgccgccgtttacgacctcttccttgcag
caagaagcagcgcggaaactcaatttccgaacgaaaaaaacgatgatgatcgcccagcag
ttgtatgaaggaattgatcttggcagcgaaggaacggtcggattaatcacttatatgcgc
acggactcgacaagagtgtcagaaagcgcgcaacaagaagcgctctcttacatagaagcg
acgtttggaaaagaatttgccgcgcaagaaaagcgaaaagaaaagaaaagtgccaatgcg
caagatgcgcatgaagcgattcgcccgacgtctgtgtttcgcgacccggagaaggtaaaa
ccatatttaacccgcgatcagttccgtttgtacaagctgatttgggaacgttttgtcgca
agccaaatggcggccgcactgcttgacacgatgagcgttgagctggaaaatggaggggtg
atctttcgggcaaacggctcgaaagtgaagtttcctggttttatgaaagtatatgtggaa
ggaacggatgaccaaaccgatgaacaggaccgtcttcttcctgatttacaggaaggagaa
accgtttttagcaaggatattgaaccgaagcagcacttcactcagccgcctccgcgctac
acggaagcacggctggtgaaaacgctagaagagcttggcatcggcaggccgtccacgtat
gcgccgacgattgatacgattcaaaagcggaactatgtcgtgcttgagaataaacgcttt
gttccgacagaactcggagaaatcgtggtagagctgattttagagtttttcccggaaatt
attgatgtggaatttacggcaaaaatggaaaaaaatttagacgaaattgaagaaggaaaa
gtacaatgggtgaaagtggtcgacgaattttaccgggagtttgaaaaacggctgcaaatc
gcggagaaggaaatgaaagaagttgaaattaaagatgaaccggcaggagtcgattgcgaa
gtatgcggcagcccaatggtatataaaatggggcggtttggaaaatttgtcgcttgctcc
aattttccagaatgccgcaacacaaagccgattgtcaaagaaattggcgttaaatgcccg
aaatgccatgaaggcaatattgtcgaacgcagcagcaagaaaaagcggattttttacgga
tgcgaccgtttcccgcaatgtgatttcgtctcatgggataagccgcttgcccgccgatgc
ccgaaatgcgaagggatgttagtggaaaagaaattgaaaaaaggcgtgcaagtgcagtgc
acatcatgcgactacgaagaagaaccacaatcttga
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