Pseudoalteromonas translucida KMM 520: PTRA_a2915
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Entry
PTRA_a2915 CDS
T04220
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
ptn
Pseudoalteromonas translucida KMM 520
Pathway
ptn03030
DNA replication
ptn03430
Mismatch repair
ptn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PTRA_a2915 (holC)
03430 Mismatch repair
PTRA_a2915 (holC)
03440 Homologous recombination
PTRA_a2915 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptn03032
]
PTRA_a2915 (holC)
03400 DNA repair and recombination proteins [BR:
ptn03400
]
PTRA_a2915 (holC)
Enzymes [BR:
ptn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PTRA_a2915 (holC)
DNA replication proteins [BR:
ptn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PTRA_a2915 (holC)
DNA repair and recombination proteins [BR:
ptn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PTRA_a2915 (holC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
ALS33955
UniProt:
A0A0U2NIP5
LinkDB
All DBs
Position
I:2757795..2758241
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AA seq
148 aa
AA seq
DB search
MNMNAQFFVLKQQDESLAKPDDHFALAAQIAADQYRLGQRVFICVDNENTAFAIDETLWA
FDPDSFVPHNLQGEGPKGGAPVEIGTTPPVGNRKVLINLANNLPDFIRRFNQVFDFVPVE
AVAKQAARERFKKLRQLGANITTQDINN
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaacgcccaatttttcgttctaaagcaacaagatgagtcgctggctaagcct
gatgatcattttgctttggcggctcaaattgccgctgatcagtatcggcttggccaacgt
gtatttatttgtgtagataacgaaaataccgcctttgccattgatgaaacactttgggca
tttgatcccgacagttttgtacctcacaacctacaaggtgaaggcccaaaaggcggcgca
ccggtagaaattggtactacgccccctgttggcaatcgtaaagttttaattaacttggct
aataacttaccggattttattcgccgctttaaccaagtttttgattttgtacccgtagaa
gccgttgctaaacaagcagctcgcgagcgttttaaaaagctacgccaactcggtgccaac
atcaccacgcaagatattaataactaa
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