Pseudomonas tolaasii: I7845_07670
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Entry
I7845_07670 CDS
T08975
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ptol
Pseudomonas tolaasii
Pathway
ptol00071
Fatty acid degradation
ptol00280
Valine, leucine and isoleucine degradation
ptol00310
Lysine degradation
ptol00362
Benzoate degradation
ptol00380
Tryptophan metabolism
ptol00410
beta-Alanine metabolism
ptol00640
Propanoate metabolism
ptol00650
Butanoate metabolism
ptol00907
Pinene, camphor and geraniol degradation
ptol00930
Caprolactam degradation
ptol01100
Metabolic pathways
ptol01110
Biosynthesis of secondary metabolites
ptol01120
Microbial metabolism in diverse environments
ptol01200
Carbon metabolism
ptol01212
Fatty acid metabolism
Module
ptol_M00087
beta-Oxidation
ptol_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ptol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
I7845_07670 (fadB)
00650 Butanoate metabolism
I7845_07670 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
I7845_07670 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
I7845_07670 (fadB)
00310 Lysine degradation
I7845_07670 (fadB)
00380 Tryptophan metabolism
I7845_07670 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
I7845_07670 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
I7845_07670 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
I7845_07670 (fadB)
00930 Caprolactam degradation
I7845_07670 (fadB)
Enzymes [BR:
ptol01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
I7845_07670 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
I7845_07670 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
I7845_07670 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
I7845_07670 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QXQ20292
LinkDB
All DBs
Position
1701969..1704116
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADTSVKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMSATAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENKAEDAL
KVGAVDAVVAPEKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEQAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVHEVLAPVIYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaatgaattg
cgtcaggccgtagacaccatcaaagcagatacttcggtcaagggcgtgatcgtctccagc
ggcaaggacgtgttcatcgtcggcgctgacatcaccgaattcgtcgacaacttcaagctg
cccgatgcagagcttgtggccggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaacgtgccaaccgtggctgccatcaatggcatcgcgctgggcggcggcctggaa
atgtgcctggccgcagacttccgtgtgatgtcggccaccgccaaaatcggcctgcctgaa
gtcaagctgggcatctacccgggttttggcggcaccgtacgcctgccgcgcctgatcggc
gccgacaacgctatcgagtggattgctgccggcaaggaaaacaaagccgaagacgcactg
aaagtcggtgccgttgacgctgtggttgccccggaaaaactggctgaagcggcactgaac
ctgatcaagggcgccatcagcggcgaatttgactacaaggccaagcgtcagccgaagctg
gaaaaactgaaactcaacgccatcgaacaaatgatgtcgttcgaaaccgccaaaggtttc
gtggcaggccaggccggcccgaactacccggcaccggttgaagcgatcaagaccatccag
aaggccgctaacttcggtcgcgacaaggcgctggaagtggaagcggcgggcttcgtcaaa
ctggcgaaaacctcggctgcacaaagcctgatcggcctgttcctgaacgatcaggagctg
aagaaaaaggccaaggcctacgacgaaatcgccaaagacgtgaaacaggctgccgtactc
ggcgccgggatcatgggcggcggtatcgcctaccagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgagcacggcatcgagcaaggcctggccgaagctgccaagctg
ctggtcggccgcgttgataaaggtcgcatgacggctgcgaaaatggctgaagtgcttaac
ggcattcgtcctacgctgtcctacggcgatttcggccacgtcgacctggtggtcgaagcg
gttgtcgagaacccgaaggtcaagcaagcggtactggccgaagtggaagcccaggttaag
gaagacactatcctggcctccaacacctcgaccatttccatctcgctgctggccaaggcc
ttgaagcgtccggaaaactttgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgcggcgagaagtccagtgagcaagccgtggcgaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagtgccggtgtggac
ttcgtgcgcatcgacaaagtgatggaaaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgacgtcatggctgaaggcttc
ccggaccgcatgaaggacgaccgccgctccgcgatcgacgcgctgtacgaggccaagcgc
ctgggccagaagaacggcaagggtttctacgcctatgaggccgacaaaaagggcaagcag
aagaaagtggccgacccgtcggtgcacgaagtgctggctccggtcatctacgaacagcgt
gaagtgtcggacgaagacatcatcaactggatgatgatcgccctgtgcctggaaaccgta
cgctgcctggaagacggcatcgttgaaaccgccgccgaagccgatatgggcctggtgtac
ggtattggtttccctccattccgtggcggtgcgctgcgttacatcgactcgatcggtgtg
gccgagttcgttgccctggctgacaaatacgctgatttgggcccgctgtaccacccgacc
gcgaagctgcgtgagatggccaaaaatggccagagcttcttcggctaa
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