Planktomarina temperata: RCA23_c01610
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Entry
RCA23_c01610 CDS
T03229
Name
(GenBank) putative signaling protein
Organism
ptp
Planktomarina temperata
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
DUF1967
DUF4381
Motif
Other DBs
NCBI-ProteinID:
AII85728
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Position
175521..177014
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AA seq
497 aa
AA seq
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MHDFVLRYGREMGFNTSIMTLIFHVLFLVLLLVALAFLLYMLHRGRVERRKMRRLIDRLR
LSNSKLSRYVDLDDLTAAQSRRYLVDRIDRHKRRETHALLYVDLDEFKTVNDTYGHDVGD
ALLIKVTDAMVAACRPGDFVARLGGDEFCVFLKGCDLESAGQVARRFLQAVVEADMEVAG
RRVIRTASIGVCELRPDQSMEDALNVADAALYEAKSKGKNQILVADQDVVLRMRQKQSRP
SAEEVGAALENGEITYFVQPIFDLEQDRIEGVEALIRWVKPDGEILLPGQFLDLMADSYK
RGVRPPLEEANAAAIGFSKLDPPIYCGWNISSKFLNNTVLPGADAEWLKALLNGLPPEMT
VFEIVESTVIENPEATKTLINRLRSKGVRIALDDFGIGMSNLERLLEYPIDILKIDRSFV
QSLTQESREGIMRGLVEMSKTMGFEIIAEGIETQNQLDLVRAVGITHAQGYFLGKPGTAD
YWLEEILRRRSQKTTSE
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
ttgcacgattttgtcttgcgctacgggcgggagatgggttttaatacttccattatgaca
ttgatatttcatgtattatttttagttttgctcttggtggcgctggctttcttgctttat
atgcttcaccgcggtcgcgttgagcgccggaaaatgcgccgccttattgaccggttgcgc
ctgtcgaactccaagctctctcgctatgttgatcttgatgacctgactgcggcgcaatcg
cgccggtacttggtggatcggatcgaccgccacaagcgccgcgaaacccacgcgctgctt
tatgtggatttggatgagttcaagaccgtgaatgacacctatggccatgatgtcggggat
gcgttgttgatcaaggtgactgatgccatggtggcggcttgtcgtcctggagattttgtc
gcgcgacttggtggggatgagttctgcgtctttcttaagggctgtgacttggagagcgct
gggcaggtggcgcgccgctttttgcaagcggtggtggaggccgatatggaggtcgcgggg
cgccgggtgatccgcaccgcgagcattggcgtgtgcgaattgcggccagatcagagcatg
gaagatgcgttgaatgttgccgacgcggcgctctatgaggcgaaatctaagggtaagaat
caaattttagtagcggatcaagatgttgtgctccgcatgcggcaaaaacagtcacgccct
tctgctgaggaggtcggagcggctttggaaaatggggaaatcacctattttgttcagcca
atttttgatttggaacaggatcgaattgaaggggttgaggctttgatccgatgggtcaag
ccggatggtgagatattattgccaggccaatttttggatctgatggcggacagttataaa
cgcggcgtccggccaccacttgaggaggccaatgcggctgcaattggattttccaaattg
gacccgccgatctactgcggatggaatatttcgagcaagtttctgaacaatactgtactg
ccgggcgcagacgcggaatggctcaaagccttgctcaacggcctgccgccagaaatgaca
gtttttgaaattgtcgagagcaccgtgattgaaaatcccgaggccaccaaaacgctcatc
aataggctgagatccaagggcgtgcggattgccttagatgattttggcattggtatgtcc
aaccttgagcgattgctggaatatccgatcgatattttgaaaattgaccgaagtttcgtg
caaagcctgacacaagaaagccgtgaggggattatgcgcggacttgttgagatgtccaaa
actatgggctttgaaattattgcagagggaatcgaaactcagaatcaactagacctcgtg
cgcgcagtgggaatcacccatgcgcaggggtattttcttggaaaaccagggacagctgac
tattggctcgaagaaatattgcgccggcggtctcaaaaaacgacatctgagtga
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