Planktomarina temperata: RCA23_c27590
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Entry
RCA23_c27590 CDS
T03229
Name
(GenBank) periplasmic serine protease DO-like protein
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
ptp
Planktomarina temperata
Pathway
ptp01503
Cationic antimicrobial peptide (CAMP) resistance
ptp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RCA23_c27590
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
RCA23_c27590
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptp01002
]
RCA23_c27590
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ptp03110
]
RCA23_c27590
Enzymes [BR:
ptp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
RCA23_c27590
Peptidases and inhibitors [BR:
ptp01002
]
Serine peptidases
Family S1: chymotrypsin family
RCA23_c27590
Chaperones and folding catalysts [BR:
ptp03110
]
Other chaperones and cochaperones
DegP / HtrA
RCA23_c27590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
Trypsin
PDZ
PDZ_6
Peptidase_S46
Peptidase_S29
Motif
Other DBs
NCBI-ProteinID:
AII88267
LinkDB
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Position
complement(2921956..2923443)
Genome browser
AA seq
495 aa
AA seq
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MEIKMNSIALPKRKDFAAYRATWVFAAALCLLILQALQATAQMLPNTFADLADEISPSVV
NITTTTVIAGRADQMPRGIVPKGSPFEEFFREFEDRRRGGNGGASRSSALGSGFVISADG
FIVTNNHVIEGADEIEVEFFSGERLAAKVIGTDKNTDIAVLKVASDAPLPFVSFGDSDTA
RVGDWVVAMGNPLGQGFSVSAGIVSARNRALSGIYDDYIQTDAAINRGNSGGPLFNLDGE
VVGVNTAILSPNGGSIGIGFSMASNVVSRVVDQLTEYGEIRRGWLGVRIQDVDEDIAESI
DGLDRAAGAVVTGVPEGPSKDAGILQGDVIVIFDGHEVEDVRDLVQTVGNTEVGKAVDVV
VVRDGAQVTLSVTLGLRDDEKLARADEPAVNEDAPKDYEDLGITLSNLTDEIREGLDLAV
GLEGVVVVDVVETSEAFEKGLKSGDVIVEAGQEKVTSLAEFEEQVSATIESGRKTMLLLV
RRGGDPRFLALTVQQ
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggagataaagatgaattcgattgccttacctaagcgcaaggattttgcagcttaccgc
gccacttgggtttttgcggcggcgctttgtctgctgatcttacaagctctacaggccaca
gctcaaatgctgccaaatacatttgccgatcttgccgatgagatcagcccctccgtggtg
aatatcaccacaacaaccgtgattgctggtcgcgccgatcaaatgccgcgtggtattgtg
cccaagggctcgccttttgaagagttctttcgggagttcgaagatcgtcgccgtggcggc
aatggtggggccagccgctcctctgccttggggtcggggtttgtgatctctgccgatggg
ttcatcgtcaccaacaatcacgtgatcgaaggggccgatgaaattgaagtagaatttttc
tccggtgaaagactggccgctaaggtcatcggaaccgataagaatacggatatcgcagtg
ctgaaggtcgcgtcggatgcaccgctgcctttcgtcagtttcggcgacagtgacacagcc
cgcgtgggcgattgggtggtggcgatgggcaaccctttgggacaggggttctcggtctcc
gcgggaatcgtttcggcccgaaaccgggcattgtctgggatttatgacgactatattcaa
acggatgccgcaattaaccggggcaattctggcgggcctttattcaatctggatggtgaa
gttgtcggtgtgaacaccgcgattttgtcgcccaatggcggctctatcggcattggcttt
tctatggcctccaatgtggtcagccgggtcgttgatcaattgacggaatacggcgaaatt
cgccggggctggctgggcgtgcggatccaagatgttgatgaagacattgctgaaagcatt
gacggtttggaccgggccgccggggccgttgtaacaggcgtgccagagggcccctcgaaa
gatgccggaatattacagggcgatgtgatcgtgatctttgatggtcatgaggtcgaggac
gtgcgcgatttggtgcaaactgtcggcaacacagaagttggcaaggcggttgatgtggtt
gtggtgcgcgatggtgcgcaggtgacattgagcgtcacccttggcctgcgcgacgacgaa
aaactggcccgcgcagatgagccagcggtcaatgaagatgcgcctaaagactatgaggac
cttgggatcaccctgtccaacctgaccgatgaaattcgtgagggtttggaccttgccgtt
ggattggaaggcgttgtcgttgtggatgttgtggaaacctccgaggcctttgaaaaaggt
ttgaaatcaggggatgtgatcgtggaggccggccaagagaaggtcacctcacttgctgag
tttgaagagcaagtgagcgcgaccattgagagcggccgtaaaacgatgcttctgctcgtg
cgccgcggcggcgatccccggtttttggccctcactgtacagcaataa
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