Pseudomonas tremae: I9H09_15450
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Entry
I9H09_15450 CDS
T08237
Name
(GenBank) sugar-binding protein
Organism
ptre
Pseudomonas tremae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Motif
Other DBs
NCBI-ProteinID:
UQB34976
LinkDB
All DBs
Position
3394998..3400052
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AA seq
1684 aa
AA seq
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MSTTTSLHSNAFNFMSFLNSGVDPRTGLYTASISLPELKANDLAGPLVPITLAFSPLNTR
DSGYGFGWNLQLSQYDPVTRMLSLSSGESFKVTGSDSTSDRLLMKEQKLDSFHLHQTGNE
TFRIVHKSGLVERLRTGGSTDNRLALPYEISSPDGRSVYLDYDLFNGQQILASVSDSQRT
LISLARTKWQIEIILNPGVLPARFTMELAGSDFRVAKVVLPTADGACWRFVYQQLNGLLC
ITEAYTPSGARETVGYHDAGHAFPHADARPALRRVTEHLTYPGNGQSTISTHYGYSAHGT
GQTNNFLGNNASGLIWEDNGEDNLYQVSGNYQYGTTQSLIVSGEPVRTVERSFNRFHLLT
EETTTQGDNVKKTSTVYHALEQSDFDQQPPYFQQPKNVTNRWSLRSNASQVRYETLSSDY
DNFGNLTRQLQPSGVLETSTWYPAEGETQGEFQCPPDPEGFVRHVRTRTVTPAQSKYGEP
APVLRNRFVYDAMAPVSGASKPWLVLTRETLLSVQGDSETTLHATGHLYIQQPEDVLSHG
RPLLDTFTLNGISTLTSFAYSKSLSRAAEGGKKGKAHKKCRACRKCRACRALRKASLGRN
ARRAETVLKTTQTLSSTLDSHTRTLNLEHSLINGEPLLTVDDAKVEIRYTYDALERVTSE
TVAPGSDYEATRRYAYTLVATEGETAHQQITDVKGVTTCSYLDGLGRVFRETRQNADGAD
GNKRMRDTYAARYDARGQLQQETRYDWLDENNKVLTLTSTFGYDDWGQQVSETGPDGVVA
YSLMNPFGWRTGDGHYMPTQSSWQQARNDPDKHYGRVESKLNLLGKPDAVERFDLDRQSM
GKQLYRYDGLGRMVEEVSVLGHIGSYRYDTFDRMVESTLPNHDKVLRSYAAHSIAELASG
VTVQSAYARLAAVIAGEQSFDGLGRLIQLRTGGRIENYRYNSSHLRISERITPSNASIHY
TYDLGLTEEPIRTQSPDGDVSFEYDEKSARMLKSVNREGERSYTYDAAGHLQQNIWKASG
QTWATRYTNSLLGRQLQRTDASGIRTVYSHDNFGRVSSVIQGQLQAAFRYDSLSRTTGTR
TTDMMSEAYLDTVVEYDEHSRETLRTLNMSGRPARTVRQVWRADDQLLSRHLQEAGKSLL
LEEFTYDNRGRLMQFSCSGATLPRNRQGRKIISQLFRFDTLDNIVASITHFIDDSKERAD
YQYNAPVDACQLMQISYSLTKGIHTIRDYIPKISFVYDDDGNMLNDEQGQQLIYDSQNRL
MSVRNSSGLSVNRYDYDGHNHLTTVTQGSDAATLRFYEGDRLSNTVQGQARTHYLSDGDT
PLGQQQVGDTASTALLLMTNASNSVIGEIQQSELRTAVYKAYGERSSNDGELQSLLAFNG
EVRDPSCGWYLLGKGYRAYNPELMRFHSPDSMSPFGAGGLNPYGYCIGNPIAFQDPTGHS
VGQLYYNQHETDGLAIALTWGFAAMGIAFSVASFGSLSPVMMAVVGVGIATEIASASMIT
ASLATSDPEKANKLMNTALIMGTVNFVAGVGVMSKSSFKAVAKTANGSLNNIGKNTGSLA
RRHSAPARLNSTASKGSAIDNALPAPPLTRSNSVSSGLIKVSVDVHPTPAPPPPPTPARP
ASPRIDYDSKTSRRSSSSLSLSSDNSSPPELKKNWPRSYIDIVDDSPPDDASKLRGTGIL
NLPT
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaccacctcactgcactccaacgccttcaacttcatgagcttcctcaacagc
ggggtcgatccgcgtaccggcctgtataccgcctccatcagcctgcccgaactcaaggcc
aatgacctggccggccccctcgtgcccatcaccctggcgttcagccccctcaatacccgc
gactccgggtacggttttggctggaacctgcaactttcccagtacgaccccgtcacgcgc
atgctctcgctgagcagtggcgagtcgttcaaggtcaccggttccgacagcaccagcgac
aggctattgatgaaggagcagaaactcgacagctttcaccttcatcagaccggtaacgaa
accttcaggatcgttcacaagtccgggctggtcgaacggctacgtaccggcggcagtacc
gataaccgcctggccctgccatacgaaatcagctcgcccgacgggcgttcggtctacctt
gattacgacctgttcaacggccagcagatcctggcgtccgtcagcgacagccagcgcacc
ttgatcagtttggcacgcaccaagtggcagattgaaatcatcctgaacccgggggtgctg
cccgcacgctttacaatggagctggccgggtctgactttcgtgtggcgaaggtagtgctg
cccaccgccgacggggcctgctggcgtttcgtttaccaacagctgaacgggctgttatgc
atcactgaggcctacaccccgagcggtgcccgggaaaccgtgggctatcacgatgccgga
catgcattcccccatgccgacgcacgtccggccttgcgcagggtcaccgagcatttgacc
taccccggaaacggtcagtcgaccatcagcacccattatggctacagtgcccacggtacg
ggccagaccaacaattttctgggcaacaacgctagcgggctgatctgggaagacaacggc
gaagacaacctgtaccaggtcagcggcaactaccagtacggcaccacgcaaagcctgatc
gtcagcggtgagcccgtacgcactgtcgagcgcagtttcaaccgctttcatttgctgacc
gaagagaccacgacccagggcgataacgtgaaaaagaccagcacggtctatcacgctctg
gagcaatccgatttcgatcagcagccgccttattttcagcagcccaaaaacgtcaccaac
agatggtcgctgcgcagcaacgccagtcaggtgcgctacgaaaccctcagcagcgactac
gacaactttggcaacctgacgcgtcagctccagcccagcggcgtgctcgaaaccagcacc
tggtaccccgcagaaggcgaaacacagggcgagtttcagtgcccgccagacccggaaggc
ttcgtgcgtcacgtccggacccgcaccgtcacccccgcgcagtccaagtatggcgagccc
gcgccggtgctgcgtaaccgctttgtttatgacgcgatggcgccggtcagcggcgcatca
aaaccctggctggtgctcacccgcgagacgctgctcagcgtgcagggcgactcggaaacg
accctgcacgccaccggccacctctatattcagcagccggaggatgtgttgagtcacggt
cgccccttgctggacacgttcacactcaacggcatcagcaccctgaccagctttgcctac
agcaagtccctgagtcgcgccgcagaaggcggcaaaaagggtaaagcgcataaaaagtgc
agagcatgcagaaagtgcagagcatgcagagcgttgagaaaagctagcctgggcaggaac
gctcgccgggccgaaaccgtgctcaagaccacccagaccctgagcagcacactggacagc
cacacccggaccctcaatctggagcactcgctgatcaatggcgagccgctgctgaccgtc
gacgacgccaaagtggagattcgctacacctacgacgccctggagcgggtcaccagcgaa
accgttgcgccgggcagcgattatgaggccacgcgtcgttatgcctacacactggtggcc
accgaaggcgagacggcgcatcagcagatcaccgacgtcaagggcgtgactacctgcagc
tacctggatgggctgggtcgggtgtttcgcgaaacgcgtcagaatgccgatggtgccgat
ggcaacaaacgcatgcgtgatacctacgcagccaggtacgacgcgcgtggccagttgcag
caagaaacgcgctacgactggctggacgaaaacaacaaggtgctgaccctgaccagcacc
tttggctatgatgactggggtcagcaggtcagtgaaacagggccggacggggtggtggca
tacagcttgatgaacccgtttggctggcgaaccggagatggccactatatgccgactcaa
agcagttggcagcaagcacgtaacgaccccgacaagcactacggtcgggtagagagcaaa
ctcaacctgctcggcaagcctgacgcagtggagcgctttgatctggacaggcagagcatg
ggcaaacagctttatcgctacgacggcctgggtcgtatggttgaggaagtcagtgtcttg
ggccatatcggcagctatcgctacgatactttcgaccgtatggtcgagagcacactgcct
aatcatgacaaggttttgcgcagttatgccgcgcacagcatcgccgaactggctagtgga
gtaactgttcagtctgcctacgctcgccttgccgcagtcattgccggagagcaatcgttc
gacggactcggccgcctcatccagctccggacgggtgggcgcatcgaaaattatcgctac
aacagcagccacctgagaatcagcgagcgcatcacgcccagcaatgcctccattcattac
acctatgatttgggcctgaccgaagagccgatccgcacgcagtcacccgatggcgacgtc
agctttgaatatgatgaaaaaagcgcacgtatgctgaagtcagtcaatagagagggggaa
cgcagctatacatacgacgccgcagggcatctgcagcagaatatctggaaggcaagcggg
caaacctgggccacccggtacaccaactcgctacttggcaggcaactgcaacgcacggat
gccagcggcatcagaactgtttacagccatgacaacttcgggagagtaagcagcgtcata
caagggcaactgcaagcagcattcaggtacgactcgctgagccgcaccactggcacacga
accaccgacatgatgtccgaggcctatctggacaccgttgtcgaatacgatgaacactcg
cgggaaacactgcgcaccctgaacatgagcggacgccctgcccgcactgttcgtcaggta
tggagagctgacgatcaactgctcagccgacaccttcaagaggctggcaaaagtctgtta
ctggaagagttcacctacgacaatcgtggaaggctgatgcagttcagctgttcgggggcg
acgctgccgcgcaacaggcaggggcgtaaaataatcagtcagctgtttcgtttcgatacg
ctggataacatcgttgcctccattacccactttatcgacgattccaaagaaagggcggat
taccaatacaacgcgcccgttgatgcctgtcagttgatgcaaatcagctactcactcacg
aaaggcatacacactattcgtgactatattcccaagatcagctttgtctacgacgacgac
ggcaacatgctcaatgatgagcagggtcaacagttgatttatgacagccaaaacagactg
atgagtgtcagaaatagcagcggtctttcggtcaaccggtatgactatgacggacacaat
caccttacaacagtcacgcaaggcagtgacgctgccacgttacgtttttatgaaggagat
cgactgagcaacacggtacagggtcaggccagaactcactacctgagcgacggcgataca
ccccttggccagcaacaggtcggtgacacggccagcacagcattgctattgatgactaat
gcgagcaacagtgtcatcggtgaaatccagcaatcggaattgcgcacggctgtttataaa
gcttatggcgaacgcagcagtaatgacggtgagttgcaaagccttctggcattcaatggc
gaagtacgcgatccgtcctgcggctggtatctgctgggcaagggctaccgcgcttacaac
cctgaactgatgcgttttcacagcccggactcgatgagcccgttcggggcgggcgggctc
aacccttatggttactgcataggcaatccgattgcctttcaggacccgaccgggcatagc
gtgggtcagctttattacaaccagcacgagaccgatggacttgccatcgcacttacctgg
ggttttgcagcgatgggcattgccttctcggtagcctcatttggttcgctttcgcctgtc
atgatggcggtcgtgggtgtagggatagccactgagatcgcatccgcaagtatgatcact
gccagcctggcaactagcgacccggagaaggccaataaacttatgaacaccgctttaata
atgggtacggtcaactttgtagctggtgttggggtgatgagcaagtcaagttttaaagcc
gtcgccaaaacggctaacggctcattaaacaacatcggaaaaaatactgggagtttggct
cgcagacactccgcccctgcccgtcttaacagcactgcaagtaaagggtctgcaatcgac
aatgcccttccagccccacctctaactcgaagtaatagcgtgtcctcaggtctaattaaa
gttagcgtagatgttcaccctacccctgccccgccgccgccaccgactcctgctcgccct
gcgtcacctcggatagactacgactcgaaaaccagcagacgttcctcatcgtctttatcg
ctttcatcagataacagctcgccccctgaattgaaaaaaaattggccacggtcatacata
gacattgtagatgatagcccccctgacgacgcatcaaaacttaggggaacaggaattctc
aacctccccacttga
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integrated database retrieval system
