KEGG   Pseudomonas tremae: I9H09_18015
Entry
I9H09_18015       CDS       T08237                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ptre  Pseudomonas tremae
Brite
KEGG Orthology (KO) [BR:ptre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptre03400]
    I9H09_18015
Enzymes [BR:ptre01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     I9H09_18015
    5.6.2.6  RNA 3'-5' helicase
     I9H09_18015
DNA repair and recombination proteins [BR:ptre03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    I9H09_18015
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: UQB35444
LinkDB
Position
4007391..4009883
AA seq 830 aa
MSRPTDFAKRWFLGRGWKPFAFQKEVWAAVKKGESGLLHASTGSGKTYAVWFAALNRFAK
ANTLTADKTPRKRKPPAAPLSVMWITPMRALAADTARALEAPLAELDIPWSVGLRTGDTS
GSERARQSRRLPSALITTPESLTLLLTRADAQAALSTLKMVVVDEWHELIGNKRGVQLQL
ALARLRHWNPQLIVWGISATLGNQEHAQQVLIGEGGMTVQGKIVKDLQVDTLLPPSIERF
PWAGHMGLRMLPQVVAEVDSSASCLVFTNTRAQSEIWYQALLEARPDWAGLIALHHGSLA
REVRDWVERALKEGALKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGHAP
GRPSRVTLVPTHSLELVEAAAAHDAVAARMIEPRESPHQPLDVLVQHLVSIALGGGFLPD
DLLAEVRSAWAYRDLSDEQWQWALAFVRNGGHSLTAYPDYRRAEPDELGIWRVPDARLAR
RHRMSVGTIVSEATVNLKYWKKGGGGGSLGSVEEGFIARLKPGDGFLFGGRLLELVRVEN
MTAYVKKATGKKAAVPRWNGGRMPLSSELADAVVEKFDAAAHGDFNSPEMQAIKPLLEVQ
QQWSGLPRRDTLLAETLKSREGWHLFLYPFAGRHVHLGLGSLLAWRLSRHRPLTFSIAVN
DYGLELLSASEIDWAQALQADLFSEKDLLADIIASLNAGELALRRFREIARISGLVFSGY
PGAAKSNRQLQASSGLFFEVFKQYDADNMLLTQAEQEVLRQELDLQRLELTLRQINSRRL
DLHAIKRATPLAFPLLVERFRESLSSEKLADRIARMVRDLEKAAGPEHEQ
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgagcagacccaccgatttcgccaaacgatggtttctcggccgaggctggaagccgttc
gcgtttcagaaggaagtctgggcggcggtgaagaagggagagtccggcctgttgcatgcc
agcacaggctcgggcaagacctacgctgtgtggtttgctgccctcaatcgatttgccaaa
gccaatacccttaccgccgataaaacaccccgcaaacgcaaaccgcccgccgcccctctg
agcgtcatgtggataacacccatgcgtgcgctggcagccgataccgcccgcgcccttgag
gcgcccttggccgagctggatattccgtggtcggtggggctgcgaaccggcgacaccagt
ggcagcgagcgtgctcgtcaaagccgacgactgccctcggcactgatcaccacaccggaa
agcctgaccctgctgctcacccgcgccgatgcgcaggccgccctgtcgacgctgaaaatg
gtggtggtggacgaatggcacgaactgatcggtaacaagcgcggcgtccagttacaactg
gcgctggcgcgcttgcgccactggaacccgcaactgattgtctggggtatttccgccacg
ctgggcaaccaggagcatgcgcaacaggtgctgatcggcgaaggcggcatgaccgtgcaa
ggcaagatcgtcaaggacttgcaggtcgatacgctgttgccgccctccatcgaacgcttc
ccgtgggccgggcacatgggcctgcgcatgttgccgcaagtcgtcgcggaggtggacagc
agcgccagttgcctggtcttcaccaatacccgcgcgcaatcggaaatctggtatcaggcg
ctgctcgaagcacgtcccgactgggctgggctgatagctctgcatcatgggtcgctggcc
cgggaagtgcgtgactgggtcgagcgcgcattgaaagaaggtgcgctcaaggccgtggtg
tgtacctccagcctggaccttggcgtggattttctgccggtcgagcgtgtgctgcagatc
ggctcacccaaaggtgtcgcgcgcctgatgcagcgtgccggacgctcgggccatgcgcca
ggtcgcccttctcgcgtgacgctggtgccgacgcacagcctggaactggtcgaagccgct
gccgcccatgatgcggtcgccgccagaatgatcgagccgcgcgagtcgccacaccaaccg
ctggacgtgttggtccagcacctggtcagcatcgcgctgggcggtggcttccttcccgat
gatttactggccgaggtgcgcagcgcctgggcttaccgcgacctgagcgacgagcaatgg
cagtgggcgctggcattcgtgcgcaacggcggtcactccctcaccgcctaccccgactac
cgccgcgccgaaccggacgagctcggtatctggcgagtgccggatgcacgcctggcgcgc
cgccatcgcatgagcgtcgggacaattgtcagcgaagccactgtaaacctgaagtactgg
aaaaaaggcggcggtggcggctcgctgggcagcgtggaggaaggctttatcgccaggctc
aaacccggtgacggatttctgtttggcggccgcctgctggagttggtccgcgtggaaaac
atgaccgcgtacgtcaaaaaggccactggcaagaaagccgccgtacctcgctggaatggc
ggacgaatgcccctgtccagcgagctggcggatgcggtggtggaaaaattcgatgccgcc
gcccatggcgatttcaacagcccggaaatgcaggccatcaaaccgctgctggaggtgcag
cagcagtggtccggcctgccgcgacgcgacacattgctggccgaaacgctgaagtctcgc
gaaggctggcacctttttctgtacccgttcgctggccgacatgttcatctggggttgggc
agcctgctggcatggcgcttgagtcgccatcgaccactgaccttttccatcgcggtcaac
gactacggcctggaactgctcagtgccagcgagattgactgggcccaagcattacaggcc
gacctgtttagcgaaaaggacctgctggccgacatcattgccagcctgaatgcgggcgaa
ctggcgttgcggcggtttcgcgaaatcgcccggatctcgggcctggtgttttccggttat
cccggtgcagccaaaagcaatcgtcagcttcaggcatccagcgggctgttttttgaggtc
ttcaagcaatacgacgctgacaatatgctgttgactcaggccgagcaggaagtgctgcgc
caggaactggatctgcaacgccttgaactgacgctgcgccagatcaatagccgcaggctg
gacctgcatgcgatcaagcgcgccacgcctctggcctttccgctgctggtcgaacgtttt
cgcgaaagtctcagctcggaaaaacttgccgaccgcatcgcacgtatggtccgcgacctt
gaaaaagccgcaggcccggagcatgagcaatga

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