Paenibacillus tritici: KDC22_05195
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Entry
KDC22_05195 CDS
T07560
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
ptri
Paenibacillus tritici
Pathway
ptri03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ptri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KDC22_05195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptri03400
]
KDC22_05195
DNA repair and recombination proteins [BR:
ptri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
KDC22_05195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
QUL55941
LinkDB
All DBs
Position
complement(1236553..1237533)
Genome browser
AA seq
326 aa
AA seq
DB search
MHTVWKGAISFGLVHVPVKMFSATEDKDISLRYIHKECGSPLSYVRKCPVCDKEVTWEEI
GKGYEYEKGKFVLFDKEELDQLSEESSKSITILDFVDLTEIDPIYFQKTYYLSPDQAGAN
AYRLLMEAMRQTGKIGIAKISIRSKSSLAAIRVLADCLAIETIYYPDEVRPVSQVPGLPE
PGTVNDKELDMAKLLISQLSQPFEPAKYTDDYRQRMLDLITHKIAGEEFHIAPARQENNV
IDLMAALQASIEAVQHIPSDPGPSKAGSGAKPRTAAGAKKRTAKSKDTGTDAGTPAAPVA
DDATGPIPVIAPKPKRRTAKSKGTGA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcatactgtttggaaaggagccatcagcttcgggcttgtgcatgtaccggtcaaaatg
ttctccgctacggaggacaaagacatctcgctgcgttatatccacaaagaatgcggcagc
ccgctgtcctatgtacgcaaatgtcctgtctgtgacaaggaagtcacctgggaggagatc
ggcaaggggtacgaatatgagaaagggaagttcgtcctgttcgacaaggaagagctggac
cagctcagcgaggagagcagcaagagcatcacaattctggatttcgtggatttgacggag
atcgacccgatttatttccagaaaacctactacctctctccagatcaggccggcgccaat
gcttaccgtctgctgatggaggccatgcgccagaccggaaagatcggcatcgccaaaatc
tccatccgctccaaaagcagtctggccgcaatccgcgtcctggctgactgcctcgcgatt
gagacgatctactacccggacgaggtccgtccggtatcgcaggtacccggcctgccggag
ccgggaacggtcaacgacaaagagctggatatggccaagctgctcatctctcagctgtcc
cagccttttgagccggccaaatataccgatgattaccgccagcggatgcttgatctgatc
acgcacaagattgccggagaagagttccatattgccccggcccgccaggagaacaatgtc
atcgacctgatggcggccctccaggccagtatcgaggccgtgcagcatatcccttccgat
cccggcccctccaaggcaggcagcggtgcgaagccgcggacagccgccggtgcgaagaag
cggacagccaagtccaaagacaccggtacagacgccggtacgcctgctgctccggttgca
gatgatgccaccggacctattccggtgatcgccccgaagccgaaacgccggacggccaag
agcaagggtaccggtgcctag
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