Pseudomonas tritici: HU722_0016785
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Entry
HU722_0016785 CDS
T07594
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
ptrt
Pseudomonas tritici
Pathway
ptrt02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ptrt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU722_0016785 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptrt02044
]
HU722_0016785 (tssC)
Secretion system [BR:
ptrt02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU722_0016785 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
QXH81666
UniProt:
A0A8H9Z1S9
LinkDB
All DBs
Position
complement(3753213..3754688)
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AA seq
491 aa
AA seq
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MTTQQHPLPAPTADQYSILDNIVAQTLLSADDEAYGIAKRGVSAFIEELIKPQNRGEPVK
KRLVDRMIAEIDTKLSLQMDEILHHPDFQALEASWKGLQLLVDRTNFRENIKIELLNVSR
QDLLEDFEDSPEVTQSGLYKHIYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYASSV
ACMAHAPFIAAAGPAFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYVGLTVP
RFLLRTPYDPLECPVKTFAYHENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGP
QSGGAVEDLPLHHFHSMGEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSA
SSVQKPKYFGLSPEGKEAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGAWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAARIVVSDVDGEPGWYRVNLSVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgactacacaacagcacccgctacctgcaccaaccgctgaccagtacagcatcctcgac
aacatagttgcgcagacactactgagtgcggacgacgaggcgtatggcattgccaaacgt
ggcgtctcagcgtttatcgaagagttgatcaagccgcaaaaccgtggcgagcccgtcaag
aaacgcttggtcgaccgcatgattgccgagatcgacacaaagctcagcctgcaaatggac
gaaattttgcaccacccggacttccaggcgctggaagcctcctggaaagggctgcaattg
ctggtcgaccgcaccaactttcgcgagaacatcaagatcgagctgctgaacgtctcccgt
caagacctgctggaagacttcgaagactcaccggaagtgactcagtccgggttgtacaaa
catatctacagtgctgaatacggtcagtttggtggccagcctgtgggtgcgattatcgcc
aactacttcctgtcacccagcgcgcccgatgtgaagctgatgcagtacgcatccagtgtg
gcttgcatggcccatgcgccttttatcgctgccgccgggccggcgttcttcggattggaa
agtttcaccggtttaccggacctcaaggatctgaaagaccatttcgaaggcccgcaattt
gccaaatggcaaagcttccgccaaagcgaagacgcgcgttatgtcgggttgacggtaccg
cgattcctgcttcgtacgccctacgatccccttgaatgtccagtcaagaccttcgcctac
catgaaaacgtggtcaacagccatgagcactacctgtggggcaatactgcctacgccttt
gccacgcgcctgactgacagtttcgcgcggtttcgctggtgcccgaacatcatcggcccg
caaagcggtggggcagtggaagacttgcctttgcatcacttccacagcatgggcgaaatc
gaaaccaagattccgactgaagtactggtgtccgaccgtcgtgaatacgaactggcacaa
gagggcttcattgccttgacaatgcgcaagggaagcgacaatgccgcgtttttctccgcc
agctcggtacaaaagccgaaatattttggcctcagtcccgaaggcaaggaagccgagctg
aattaccgcttgggtacccagttgccttacatgatggtggtcaatcgcctggcccactac
ctcaaggtccttcagcgcgagcaactgggggcgtggaaggaacgcaccgaccttgaactg
gaactcaataaatggattcgccagtacgtggccgaccaggaaaaccccagcgccgaggtg
cgtgggcggcgccccttgcgcgcagcgcgcattgttgtcagtgacgtcgacggcgagccc
ggctggtatcgcgtcaacctgagtgtacggccgcacttcaagtacatgggggcagacttc
acgctgtccctggttggcaagctcgacaaagaatga
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