Paraburkholderia terricola: CUJ90_16620
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Entry
CUJ90_16620 CDS
T05812
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pts
Paraburkholderia terricola
Pathway
pts03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pts00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CUJ90_16620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pts03021
]
CUJ90_16620
03400 DNA repair and recombination proteins [BR:
pts03400
]
CUJ90_16620
Enzymes [BR:
pts01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CUJ90_16620
Transcription machinery [BR:
pts03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CUJ90_16620
DNA repair and recombination proteins [BR:
pts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CUJ90_16620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AXE93767
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All DBs
Position
mHS1_A:complement(3696845..3697822)
Genome browser
AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGESHAKVVMEPFERGYGHTLGNALRRVLLSSMIGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPDHVIAHLSKGGKLDVQIKVEKGRGYVPGNVRRYGEESAKIIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTEATAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgttgaagcccaagatcatcgcagttgaatcgcttggcgaaagccac
gcgaaagtggtcatggaaccgtttgaacgcggttacggccacaccttgggtaacgcgctt
cggcgcgtattgctgtcgtcgatgatcggctacgcgccgaccgaagtgacgatcgcaggc
gtcgtacatgagtattcgacgctcgacggtgtgcaagaggatgtggtcaacctgctgttg
aacctgaagggtgtggtcttcaagctgcataaccgtgacgaagtgacggttacgctgcgc
aaggaaggtgaaggcgttgtcaccgcgggcgacattgaacttgcgcacgattgcgaagtg
atcaacccggatcatgtgattgcgcatctgtcgaagggcggcaagctcgacgtgcagatc
aaggttgaaaaaggccgcggctacgtgccgggcaatgtgcgtcgttacggcgaagaatcg
gccaagatcatcggccgcatcgtgctggacgcgtcgttctcgcccgttcgccgcgtgagc
tacgccgttgaaagcgcgcgtgtcgaacaacgtaccgacctcgacaagctcgtgatgaac
atcgagacgaacggtgtgatctcgccggaagaagcaatccgtcaatcggcgcgtattctg
gtcgaccaactgtcggtgttcgccgcactggaaggtaccgaagctacggcagaagcaccg
tcgcgcgcgccgcagatcgacccgatcctgctgcgtccggttgatgatctcgaactgacg
gttcgttccgcgaactgcctgaaggccgagaatatctactacatcggcgacttgatccag
cgcactgaaaacgagctgctcaagacgccgaacctgggccgcaagtcgctgaacgaaatc
aaggaagtattggcgtcgcgtggtttgacgctcggcatgaaactcgagaactggccgccg
gctggtctggacaagtaa
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