Photorhabdus thracensis: VY86_20620
Help
Entry
VY86_20620 CDS
T03944
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ptt
Photorhabdus thracensis
Pathway
ptt00540
Lipopolysaccharide biosynthesis
ptt01100
Metabolic pathways
ptt01250
Biosynthesis of nucleotide sugars
Module
ptt_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VY86_20620
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ptt01005
]
VY86_20620
Enzymes [BR:
ptt01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
VY86_20620
Lipopolysaccharide biosynthesis proteins [BR:
ptt01005
]
Lipid A
VY86_20620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AKH65403
UniProt:
A0A0F7LU02
LinkDB
All DBs
Position
complement(4739916..4740770)
Genome browser
AA seq
284 aa
AA seq
DB search
MQQKVVNISDIKVANDLPFVLFGGMNVLESRDLAMSICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHAPVQAQAVAEVVDVIQLPAFLAR
QTDLVEAMARTGAVINVKKPQFISPAQMGNIVEKFKEGGNDQVILCDRGSNFGYDNLVVD
MLGFNVMVQATGGHPVIFDVTHSLQCRDPFGAASGGRRAQVAELARAGMAVGIAGLFLEA
HPDPVNAMCDGPSALPLAKLEPFLLQMKAIDDAVKSFPQLDTSK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagaaagtggttaatattagtgatatcaaggtcgctaacgatctgccgtttgtt
ctctttggtggtatgaatgtccttgagtcacgggatttggccatgagtatttgtgagcac
tatgtgacagtgacacaaaaactgggcattccttatgttttcaaagcttcctttgataaa
gcaaaccgatcatcaattcactcttaccgtggccctgggctggaagagggaatgaagatt
tttcaggagctgaaacaaacttttggtgtgaaaattattactgacgtgcatgcgccagta
caggcgcaggcggtggcggaagtggttgatgtgatccaacttccggcatttctggcacgc
cagactgatttggttgaggcaatggcccgcaccggcgcggtgattaacgttaaaaagcca
cagtttatcagcccagcccagatggggaatattgttgaaaaattcaaagaaggcggcaac
gatcaggtgatcttgtgtgatcgtggcagcaactttggttatgacaatttggttgtggat
atgctgggtttcaatgtcatggttcaggccacgggggggcatcctgtgatttttgatgta
actcattcactgcaatgccgtgatccgtttggtgccgcgtcgggtggtcgtcgtgctcag
gtggctgaactggcgcgtgcgggaatggcagttggtattgccggcctgttccttgaagct
catcccgatccggtaaatgcgatgtgcgatggcccatcagcgttgccgttggcaaaactt
gagccattcctgctccagatgaaagcgattgatgacgcagtaaaaagcttccctcaactg
gataccagcaaataa
DBGET
integrated database retrieval system
