Pseudomonas tohonis: TUM18999_18020
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Entry
TUM18999_18020 CDS
T07887
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw00071
Fatty acid degradation
ptw00280
Valine, leucine and isoleucine degradation
ptw00310
Lysine degradation
ptw00362
Benzoate degradation
ptw00380
Tryptophan metabolism
ptw00410
beta-Alanine metabolism
ptw00640
Propanoate metabolism
ptw00650
Butanoate metabolism
ptw00907
Pinene, camphor and geraniol degradation
ptw00930
Caprolactam degradation
ptw01100
Metabolic pathways
ptw01110
Biosynthesis of secondary metabolites
ptw01120
Microbial metabolism in diverse environments
ptw01200
Carbon metabolism
ptw01212
Fatty acid metabolism
Module
ptw_M00087
beta-Oxidation
ptw_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
TUM18999_18020 (fadB)
00650 Butanoate metabolism
TUM18999_18020 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
TUM18999_18020 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
TUM18999_18020 (fadB)
00310 Lysine degradation
TUM18999_18020 (fadB)
00380 Tryptophan metabolism
TUM18999_18020 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
TUM18999_18020 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
TUM18999_18020 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
TUM18999_18020 (fadB)
00930 Caprolactam degradation
TUM18999_18020 (fadB)
Enzymes [BR:
ptw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
TUM18999_18020 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
TUM18999_18020 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
TUM18999_18020 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
TUM18999_18020 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
BCG23611
UniProt:
A0A6J4E539
LinkDB
All DBs
Position
1966717..1968864
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALEGGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDEELVAGNLEANKIFSDFEDLQVPTVVAINGIALGGGLE
MCLAGDYRVMSETAKIGLPEVKLGIYPGFGGTVRLPRVIGTDNAIEWIASGKENKAADAL
KVGAVDAVVAPAKLQEAALDLVKRAISGELDFKAKRQPKLEKIKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTPVAASLIGLFLNDQEL
KKKAKQHDEIARDVKLAAVLGAGIMGGGIAYQSASKGTPILMKDIREEGIQMGLSEASKL
LGKRVEKGRMTPAKMAEALTAIRPTMSYGDFGAVDIVVEAVVENPKVKQIVLAEVEGVVR
EDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFVRIDKVMEKFGWPMGPAYL
SDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQKNGKGFYAYETDKRGKP
KKVSDPEAYELLKSIVVEQRELTDEDIINFMMIPLCLETVRCLEDGIVDTAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADKYAELGALYHPTAKLREMAAKGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagggcggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgtcttaccctcaatgagctg
cgtcaggcggttgacgccatcaaggccgatgcgtcggtcaagggcgttatcgtcagcagt
ggcaaggacgtgttcatcgtcggtgcggacatcaccgaattcgtcgacaacttcaagttg
cccgacgaggagctggtggcaggcaacctcgaagccaacaagatcttcagcgatttcgaa
gacctgcaggttccgaccgtggttgcgatcaatggcatcgccctcggcggcggcctggaa
atgtgcctggccggtgactaccgcgtcatgagcgagaccgccaagatcggcctgcctgaa
gtcaagctgggcatctacccgggcttcggcggcaccgtgcgcctgccgcgcgtgatcggt
accgacaacgccatagagtggatcgcttccggcaaggaaaacaaggccgccgacgccctg
aaagtgggtgccgtcgacgccgtcgtcgctcctgcgaaactccaggaagccgctctggac
cttgtcaagcgcgccatctccggcgaactggacttcaaggccaagcgccagcccaagctg
gagaagatcaagctcaacgccatcgagcagatgatggccttcgaaaccgccaagggtttc
gtggccggccaggccggtccgaactacccggctccggtcgaagccatcaagaccatccag
aaagccgccaacttcggtcgtgacaaggcgctggaagtcgaggccgccggcttcgtcaag
ctggccaagaccccggtcgctgccagcctgatcggcctgttcctgaatgaccaggaactg
aagaagaaagccaagcagcacgacgagatcgctcgcgacgtgaaactggccgccgtactc
ggcgccggcatcatgggcggcggcatcgcctaccagtcggcttccaaaggcactccgatc
ctgatgaaggatatccgcgaagagggtatccagatggggctgtccgaggcttccaagctg
ctcggcaagcgcgtcgagaaaggccgcatgaccccggccaagatggccgaggccctgacc
gccattcgcccgaccatgtcctacggcgacttcggtgccgtcgacatcgtcgtcgaagcc
gtggtcgagaacccgaaggtcaagcagatcgtgctggccgaagtggaaggcgtggttcgc
gaggatgccatcctggcttccaacacctccaccatctccatcagcctgctggccaaggcg
ctgaagcgtcctgagaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccc
ctggtcgaagtcatccgtggcgagaagtccagcgaagtggccgtggccaccaccgttgcc
tacgccaagaagatgggcaagaacccgatcgtggtcaacgactgccccggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggcttctccaagctgctgggcttcggcgtcgac
ttcgtgcgcatcgacaaggtcatggagaagttcggctggcccatgggcccggcctacctc
tccgacgtagtcggcatcgacaccggccaccacggccgtgacgtgatggccgaaggcttc
ccggaccgcatggccgtggaaggcaagaccgccgtcgacgtgatgtacgaggccaaccgc
ctgggccagaagaatggcaagggcttctacgcctatgaaaccgacaagcgcggcaagccg
aagaaggtctccgatccggaagcctacgagctgctgaagtccatcgtcgttgagcagcgt
gagctgaccgacgaagacatcatcaacttcatgatgatcccgctgtgcctggaaaccgtt
cgttgcctggaagacggcatcgtcgacaccgcagccgaggccgacatgggcctgatctac
ggtatcggcttcccgcccttccgtggtggtgcactgcgttacatcgactccatcggtgta
gccgaattcgttgccctggccgacaagtacgccgaactgggcgcgctgtaccacccgacc
gccaagcttcgtgaaatggccgccaagggccagaagtttttcggttaa
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