Pseudomonas toyotomiensis: JWV26_18560
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Entry
JWV26_18560 CDS
T07285
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pty
Pseudomonas toyotomiensis
Pathway
pty00071
Fatty acid degradation
pty00280
Valine, leucine and isoleucine degradation
pty00310
Lysine degradation
pty00362
Benzoate degradation
pty00380
Tryptophan metabolism
pty00410
beta-Alanine metabolism
pty00640
Propanoate metabolism
pty00650
Butanoate metabolism
pty00907
Pinene, camphor and geraniol degradation
pty00930
Caprolactam degradation
pty01100
Metabolic pathways
pty01110
Biosynthesis of secondary metabolites
pty01120
Microbial metabolism in diverse environments
pty01200
Carbon metabolism
pty01212
Fatty acid metabolism
Module
pty_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JWV26_18560 (fadB)
00650 Butanoate metabolism
JWV26_18560 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
JWV26_18560 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JWV26_18560 (fadB)
00310 Lysine degradation
JWV26_18560 (fadB)
00380 Tryptophan metabolism
JWV26_18560 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JWV26_18560 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JWV26_18560 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JWV26_18560 (fadB)
00930 Caprolactam degradation
JWV26_18560 (fadB)
Enzymes [BR:
pty01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
JWV26_18560 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
JWV26_18560 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
JWV26_18560 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
JWV26_18560 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QSL91750
LinkDB
All DBs
Position
4010941..4013088
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRASVDAIKADGSIKGVIVTS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLAVPTVVAINGIALGGGFE
MCLAADYRVMSDSAKIGLPEVKLGIYPGFGGTVRLPRVIGTDNAVEWIASGKENRADEAL
KVGAVDAVVSADKLQAAALDLVKRAISGELDYKAKRQPKLEKLKLNAIEQMMCFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEATGFVKLAKTSVAESLIGLFLNDQEL
KKKAKHHDEIARDVKLAAVLGAGIMGGGIAYQSASKGTPILMKDIREEGIQMGLNEASKL
LGKRVEKGRMTPAKMAEALNAIRPTMSYGDFGNVDIVVEAVVENPKVKQIVLAEVEDAVR
EDAILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFVRIDKVMEKFGWPMGPAYL
SDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYDANRLGQKNGKGFYAYETDKRGKP
KKVTDPAAYELLKSIVVEEREVTDEDIINFMMIPLCMETVRCLEDGIVDTAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADKYAELGALYHPTAKLREMAAKGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagagcggcatcgtcgaattg
aagttcgacctcaagggtgagtccgtcaacaaattcaaccgtcttaccctcaacgagctg
cgcgcctccgtcgatgcgatcaaggctgacggttcgatcaagggcgtgattgtcaccagt
ggcaaggacgtgttcatcgtcggcgccgatatcaccgagttcgtcgacaacttcaaactg
cccgacgcagagctggtggctggcaacctggaagccaacaagatcttcagtgatttcgaa
gacctcgccgtgccgaccgtcgtcgccatcaacggcatcgccctgggtggcggtttcgag
atgtgcctggccgctgactatcgcgtaatgagcgacagcgccaagatcggcctgccggaa
gtcaaactgggcatctacccgggcttcggcggcaccgtgcgcctgccgcgcgttatcggt
accgataacgccgtcgagtggatcgcttcgggcaaggaaaaccgtgccgatgaagccctg
aaagtgggcgccgtcgatgccgtggtcagtgccgacaagctgcaggccgctgcactggat
ctggtcaagcgcgccatctccggcgagctggactacaaggccaagcgtcagcccaagctg
gaaaagctcaagctcaacgccatcgagcagatgatgtgcttcgagaccgccaagggcttc
gtcgctggccaggccggcccgaactacccggctccggtcgaagcgatcaagactattcag
aaagccgccaacttcggccgtgacaaggcgctggaagtcgaggccaccggcttcgtcaag
ctggccaagacctcggttgccgagagcctgatcggtctgttcctcaatgaccaggagctg
aagaagaaagccaagcaccacgacgagatcgctcgcgacgtgaaactggccgccgtactc
ggcgccggcatcatgggtggcggcatcgcctatcagtcggcctccaagggcaccccgatc
ctgatgaaggatatccgtgaagagggtatccagatgggcttgaacgaggcttccaagctg
ctcggcaagcgcgtcgagaaaggccgcatgactccggcgaagatggctgaagccctcaac
gccatccgcccgaccatgtcctacggcgatttcggcaacgtcgacatcgtcgtcgaagcc
gtggtcgagaaccccaaggtcaagcagatcgtgctggccgaggtggaagacgcggtgcgt
gaagacgccatcctggcctccaacacctcgaccatctccatctctctgctggcccaggcg
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtcgaagtcatccgtggcgagaagtccagcgaagtggccgtggccaccaccgttgcc
tacgccaagaagatgggcaagaacccgatcgtggtcaacgattgccccggctttttggtc
aaccgcgtactgttcccgtacttcggcggcttctccaagctgctgggcttcggcgtcgac
ttcgtgcgtatcgacaaggtgatggagaagttcggctggcccatgggcccggcttacctc
tccgacgtggtcggcatcgacactggccaccacggtcgtgacgtgatggctgaaggcttc
ccggatcgtatggctgtcgaaggcaagactgccgtcgacgtgatgtacgacgccaatcgc
ctgggtcagaagaacggcaagggcttctatgcctacgagaccgacaagcgcggcaagccg
aagaaggtcaccgacccggctgcttacgagttgctcaagtccatcgtggtcgaagagcgc
gaagtcaccgacgaggacatcatcaacttcatgatgatcccgctgtgcatggaaaccgtt
cgttgcctggaagacggcatcgtcgacaccgcagccgaggccgatatgggcctgatctac
ggtatcggcttccctcccttccgtggcggtgcgctgcgctacatcgattccatcggtgtg
gctgaattcgtcgccctggctgacaagtatgccgagctgggcgccctgtaccacccgacc
gcaaaacttcgcgaaatggccgccaagggccagaagttcttcggttaa
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